CI01000058_00728698_00738214


Basic Information

Item Value
gene id CI01000058_00728698_00738214
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 728520 ~ 738938 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00728698_00738214.mRNA
GTATAAAATTATGGATGTGGATACGAACCCAGACTTCACTGCTAAACCTTTTACAACTCACTGATAACCAATTCAAGAATTAATATGATCCTTTAGTAGTTTGTACCTGGAATATGAGGGAGAAGCAGCAGTACAAGAAGACAATGGTGATTTAAATAACCCCCACCGGTAGAAGAGGATGGTGAAAGTCTCATCAGTCTCGCCATTGCAACCAGGCACTGCAAGCCTTAGCAATGTCATTCCAGGGTGGTCCGGTAACCTCTACATCTCACCCAATTCCAGCATTGAAGCTGCAGTTCCCCATATTGAGTATTTAGCAGTGCGACCCATGAGTGATGAAAGAGAAATACTTCAAGCCACAGTAAGGAACTATAATACTCGACTTGCTAGTATTCTTAGAGCCACAGTCACCACCTTTGATGATTTGAAGTGTAGGAGCTTTAGTGGAACGAAACAGGGCAGAGGAAAGAGCTTACTGGAAGCAACGCAATGCAGAGCAAACCACCAGAAAAGGAGGACCGAGGGCCTCAATTTACAGGAGCGACAAAGGAAGTACTGCAACCAGAAAAAACAACAGGAGATGATTGAAGGAGGAGATCTTGTTTGGGTTTGTACTCACCCATTGTCTCGGGTAGGGAATGCGTTCAAGGCAAAGTTAGCCCCTAAATGGCAAGTTCCTGCAAAGTATACAAGTACATATACTATCACACGCATTAAACTTGGTGTTTTACCAATTTCTAACGTGACAGTCACAGCGCGGTTCTCACTCATGTCTCTCCCTCATGTCTCTCCCTCTTTTCTTTCCGGTCTCCTCCTCCTGCATCCTCCGCGACCTCTCACCCTGACTCCTAATTGGATCTTTCTTCCAGATCATAAATGGAGATTAACAGACGATGCGGCACAAAAAGGAGAGAAGCCAGAAAAAGATGGAGATTATCTCATGGTTCCTACATTGTCAGATGGTCTTACTGTCTCTTCCTCCACTACAGTGGAGAGTCCAGCAGTCTCCCTTATTCCAAAAATTCTGATGGAGGTGTTCTCTGAGTCCAAGGTCTCCTTCCTTCTTCAGCATTGCCAAGGGGATTGCACTATCGACCTCTTGCTGGTGCCAATGCTCCCCAGTATATAAGTATATACCCTATCTGTGGCAGAAACTAAAGCTATGGAGGAGTACATTTAGGAGAATGGCCAGCTTCAACTCCTCCTCACCATATGCCAGTGTGTTGAAAAAACTGGATGAAATATTCTGAATGATACCAATCCACAATCTGACTTGTGATGCACCCCGGAATCATAACCACACCATGTTTGTTCGTTTGGCCAGAGGAGAACTGGCCCCCCGACTGAGTCTGGTTTCTCCAAAGTTTATTTTCTCAATTTCTGTCAAGTCAAGACAAGTCACTTTTATTTATATAGCGCTTTTTGCAATACAGACTGTGTCAAGCTTTACAGTAACAGGAAAATAATTTTTGCTCCACAGCAGCTCTAGAAAAAAATGGTGTCATTGTCCAGCTTAAGGTAGTTCAGTACTGATTCATTCTATTGTAAAAATCATTAGTTATTCATTTAGTTAATTTATCTATACAGCAGCTCTGGATAAAACAGTATTGTCATCGTCCAGCTGAGTTCAGTTCGCATACAATGGTGTCAATGCAGGCAGATCAAAAACATTGTTGAATATGAAGTTTCCCCAACTAAGCAAGCCAGAGGCAACAGTGGCAAGGAACCCAAAATCCATCAGGTGACAAAAATGGAGAAAAAAACCTTGGGAGAAACCAGGCTGTTCTGTCACAGATGAACTCTGATCTGACTCTGCCTCAGTCAAAACCGGCCCCAGCTAAGGCTAGGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00728698_00738214.mRNA True 1853 mRNA 0.43 7 728520 738938

Neighbor

gene id symbol gene type direction distance location
CI01000058_00652594_00653181 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding upstream 73617 652335 ~ 654903 (+)
CI01000058_00592498_00596709 NA coding upstream 131707 592331 ~ 597171 (+)
CI01000058_00548398_00567030 NWD1 coding upstream 161348 547827 ~ 567172 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding upstream 184493 529185 ~ 544027 (+)
CI01000058_00517452_00527181 TMEM38A coding upstream 199713 517150 ~ 528807 (+)
CI01000058_00847992_00862210 NA coding downstream 108359 847297 ~ 862430 (+)
CI01000058_00870909_00930600 ADGRL2A, ADGRL2 coding downstream 131971 870909 ~ 930600 (+)
CI01000058_01239590_01240099 NA coding downstream 500564 1239502 ~ 1240300 (+)
CI01000058_01248234_01262911 PRKACBA, PRKACB coding downstream 509296 1248234 ~ 1263318 (+)
CI01000058_01266712_01271962 SAMD13 coding downstream 526815 1265753 ~ 1274437 (+)
G247617 NA non-coding upstream 692 727439 ~ 727828 (+)
G247578 NA non-coding upstream 11743 716510 ~ 716777 (+)
G247563 NA non-coding upstream 45078 683226 ~ 683442 (+)
G247337 NA non-coding upstream 221167 506308 ~ 507353 (+)
G247342 NA non-coding upstream 239117 489166 ~ 489403 (+)
G247641 NA non-coding downstream 1910 740848 ~ 754686 (+)
G247653 NA non-coding downstream 24657 763595 ~ 763815 (+)
G247663 NA non-coding downstream 46087 785025 ~ 785240 (+)
G247667 NA non-coding downstream 51341 790279 ~ 790496 (+)
G247672 NA non-coding downstream 55150 794088 ~ 794313 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 272776 434913 ~ 455744 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 489671 1278592 ~ 1289874 (+)
G247940 NA other downstream 714059 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1056775 1794468 ~ 1800421 (+)
G250039 NA other downstream 3955470 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 4087438 4864571 ~ 4888216 (+)

Expression


Co-expression Network