CI01000058_00847992_00862210


Basic Information

Item Value
gene id CI01000058_00847992_00862210
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 847297 ~ 862430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00847992_00862210.mRNA
GTATTAAAGGGTGGTGAGATATATTTAGTGTATCTTCAAGAAACCTAGGGGGGTGCACACACTGTTTTTAATGGGCTCCTAAGTGGCTCGTTACTGGAGTGACGATGTTTCCCATGAGGCCATGAGTGTGTTTTATGGGAGGCCGGTGGAGGGTGTAAACATGCAGAGAAGGAAAACATTTAAAATATGAGATACTGTATGTGATAGTGTTCTCTTTGGCTGGAGAATATGCACCGGTGGCTTTAGTGGACGAGAAACCTGCCTCCTCACAGACAAGGATGGTAGTGGAACAGGTTTTGGAGAAGAGAGTCAGATAAACTGTAACGACAGGCTTTGAGGTAAATGGCTTGTTTGTAATGCGGGAGGTGCTGTTTCAGGTCTCAATCACCTTCCAGTAGAGGGTTTCTACACCTGGGAGGAAATCTGTGTGAATTTGCTACTGGAAAAAAACAAAAAACAAACAAAAAAAATCCATGGAGAAACTGAGGCGAGTGAGACTGGAGCAGTTTAAAGGAGGAAGTTTTTATGCCTGAGGAGCTCTTCATCGACAGCCAAACACTGACAGTCCACTGTGGTTTTCTTGCAGGCTCGGAGGTCAATGATGGTTATCTCTCAGAGTGACTTCCCTGGATCGTTGTGACTACAGTGATTTCGACCCAGACATGTGGAAAGCGGCAAGTACAGTCAGAGCCAGGATGGGATGTTCAGAATGGAAGTCTTTGGTCCTCTGTGGCCTAGTGTTCGTCTTGACGGTCGTACAGAGTTCTGACGCATGTACCTATATCAAAGAACCTCCTGATAGCCTGCCTGCTGTTGCCATGGAAGAGAAGGATGCAGATGAATTGGGGCAAATGGTGGTGTTGAATACCAATGAGCCCAGGAGCTGATAGCTCACAAACATGTTTAACGCTTTTTTGCTAAACTACTGACACTGCAAGTTCTTTTTCTTTTCTTTTTTCTTTTTTTTTTTTTTTTGTATTGTGTTTTTAATGGCCCAATAATGTGTCAGGACAGCGGAAGTGGTCAGTAAGAGTGGCCGTCTCACTGAAACTCAATATCTGGATTAATACCAGGCTTCAGTTTCCACTGTAGACATTTGCCTAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00847992_00862210.mRNA True 1107 mRNA 0.44 2 847297 862430

Neighbor

gene id symbol gene type direction distance location
CI01000058_00728698_00738214 NA coding upstream 108359 728520 ~ 738938 (+)
CI01000058_00652594_00653181 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding upstream 192394 652335 ~ 654903 (+)
CI01000058_00592498_00596709 NA coding upstream 250484 592331 ~ 597171 (+)
CI01000058_00548398_00567030 NWD1 coding upstream 280125 547827 ~ 567172 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding upstream 303270 529185 ~ 544027 (+)
CI01000058_00870909_00930600 ADGRL2A, ADGRL2 coding downstream 8479 870909 ~ 930600 (+)
CI01000058_01239590_01240099 NA coding downstream 377072 1239502 ~ 1240300 (+)
CI01000058_01248234_01262911 PRKACBA, PRKACB coding downstream 385804 1248234 ~ 1263318 (+)
CI01000058_01266712_01271962 SAMD13 coding downstream 403323 1265753 ~ 1274437 (+)
CI01000058_01280337_01289153 DNASE2B coding downstream 416162 1278592 ~ 1289874 (+)
G247683 NA non-coding upstream 39985 806885 ~ 807312 (+)
G247672 NA non-coding upstream 52984 794088 ~ 794313 (+)
G247667 NA non-coding upstream 56801 790279 ~ 790496 (+)
G247663 NA non-coding upstream 62057 785025 ~ 785240 (+)
G247653 NA non-coding upstream 83482 763595 ~ 763815 (+)
G247639 NA non-coding downstream 68574 931004 ~ 932179 (+)
G247696 NA non-coding downstream 73785 936215 ~ 936445 (+)
G247705 NA non-coding downstream 104718 967148 ~ 967373 (+)
G247711 NA non-coding downstream 108209 970639 ~ 970871 (+)
G247723 NA non-coding downstream 144295 1006725 ~ 1007170 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 391553 434913 ~ 455744 (+)
G247940 NA other downstream 590567 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 933283 1794468 ~ 1800421 (+)
G250039 NA other downstream 3831978 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3963946 4864571 ~ 4888216 (+)

Expression


Co-expression Network