Item | Value |
---|---|
gene id | CI01000058_01266712_01271962 |
gene name | SAMD13 |
gene type | misc |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000058 |
NCBI id | null |
chromosome length | 5213219 |
location | 1265753 ~ 1274437 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
samd13 | Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human SAMD13 (sterile alpha motif domain containing 13). |
id | name | namespace |
---|---|---|
GO:0005575 | cellular_component | cellular_component |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000058_01266712_01271962.mRNA | False | 1343 | mRNA | 0.35 | 3 | 1265753 | 1272052 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000058_01248234_01262911 | PRKACBA, PRKACB | coding | upstream | 2435 | 1248234 ~ 1263318 (+) |
CI01000058_01239590_01240099 | NA | coding | upstream | 25453 | 1239502 ~ 1240300 (+) |
CI01000058_00870909_00930600 | ADGRL2A, ADGRL2 | coding | upstream | 335153 | 870909 ~ 930600 (+) |
CI01000058_00847992_00862210 | NA | coding | upstream | 403323 | 847297 ~ 862430 (+) |
CI01000058_00728698_00738214 | NA | coding | upstream | 526815 | 728520 ~ 738938 (+) |
CI01000058_01280337_01289153 | DNASE2B | coding | downstream | 6540 | 1278592 ~ 1289874 (+) |
CI01000058_01298298_01311989 | BMP7A | coding | downstream | 26024 | 1298076 ~ 1313046 (+) |
CI01000058_01348684_01352173 | NA | coding | downstream | 76632 | 1348684 ~ 1352588 (+) |
CI01000058_01364846_01374544 | NA | coding | downstream | 92794 | 1364846 ~ 1374584 (+) |
CI01000058_01384467_01388274 | NA | coding | downstream | 112152 | 1384204 ~ 1388927 (+) |
G247917 | NA | non-coding | upstream | 16849 | 1221593 ~ 1248904 (+) |
G247995 | NA | non-coding | upstream | 33907 | 1230210 ~ 1231846 (+) |
G247910 | NA | non-coding | upstream | 55802 | 1201166 ~ 1209951 (+) |
G247889 | NA | non-coding | upstream | 111771 | 1148527 ~ 1153982 (+) |
G247821 | NA | non-coding | upstream | 225409 | 1040111 ~ 1040344 (+) |
G247960 | NA | non-coding | downstream | 31249 | 1303301 ~ 1330860 (+) |
G248027 | NA | non-coding | downstream | 128936 | 1400988 ~ 1401268 (+) |
G248031 | NA | non-coding | downstream | 131332 | 1403384 ~ 1403656 (+) |
G248035 | NA | non-coding | downstream | 134604 | 1406656 ~ 1407006 (+) |
CI01000058_00592498_00596709 | NA | other | upstream | 668582 | 592331 ~ 597171 (+) |
CI01000058_00435196_00437830 | AGTRAP | other | upstream | 810009 | 434913 ~ 455744 (+) |
G247940 | NA | other | downstream | 180945 | 1452997 ~ 1456447 (+) |
CI01000058_01794468_01800421 | KISS1 | other | downstream | 523661 | 1794468 ~ 1800421 (+) |
G250039 | NA | other | downstream | 3422356 | 4694408 ~ 4697161 (+) |
CI01000058_04864571_04888198 | NA | other | downstream | 3554324 | 4864571 ~ 4888216 (+) |