CI01000058_01384467_01388274


Basic Information

Item Value
gene id CI01000058_01384467_01388274
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1384204 ~ 1388927 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01384467_01388274.mRNA
TTATAAATGAAGTCCACTTGACTTTTGAATTTCTGTTCTAAAGGTTTAACAAAACAAAAACTTGAAATTTTTACAATGGAAAAAAAAAAAAAAAAAAAATTGCTGATACAACATTTATTTACTAAAGGAACTGTTTGCCAAACAACTGATTTGATAATATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTTTGTGTGTTAATGAAAGTCTTCAGACATCAGGTCTGCAATGGTGCTCCCCATCTATCAGTACATAAGAGGCGTATCAATCCCTATGAAGACACACAACAGAGACAGATATAGAGGAGGTGGTGTGGTTCCTCTCTTGCTGAGCATCCTTGAGAGATCGCTAAGTTCTGTTAAGGCATCATACATAACTCCAAGATTAAACACAAAGGACTCAGAGTTGAAAATTAATCTTATGCCTCATGTCACACAGATACTAAGAGAGATGGAGGTCTGCAAGGTCCAACGGGTTCAGAACTCGGTCTCAGGACAGGAACCCCATCAGTGCCTCTCACTTCTGCCAGAGGTGATGCTGAAGAATGAAGATATTGGTGGTACAGATACAGAGTCATCAATCACAGTTAAGTCAGAGCTGTGTGATAATCAGGCCAGTGAATCAAACTCATCTGCGGTGCAGTCTGGCAGCGATTGTCATGTTGAACTTAAACTAACTGAACAAGACCCGTTATCTCTTCAACTTGAACTTGAAACCTTTGAAGAGGTGTTACAAAAGGCAAGGCGAAAACACCAGAATGCATTATGCAGGATATGCGGCAAGTCTTTCAGGAACAATGGACGTTTGCAGAATCACATGGTAGTACACCAAAATGAGAGACCTTTTTGCTGTGGTTCTTGTGGCAGTCGTTTTAAAACGAAATCCAGCTTGAAAGAACATGAGAGACTTCATACAGGTGATTATCGCTACAGCTGCCCAAGATGTGGAAGGGGTTTTTCTCGATCAAATCATGTCAGAAAGCACCTTAAGGCAGCTTATTGTCATAAACCTTAATCCTCACTATTTCCACCAAAAAAATGAATTCTAAATTTTAATTCTTTATTAGATATACGGCTTTACAAATTAAAATATCAAAACAGATATCTGAGAGAACTCTGCTTTACTTCTGAATGATGTAATATTGTTATATGAAATATTGTTTAAACTATTTTGATTGCTTTGCATGTAACTCCAGACAAATTAGGTATTATCTAGATTCCTTTTTGAGATGTCCATATTTCAGGCCCTAGTACAGTCCCAACCATATGAGGCTCTCAGTCTGGCTTTAAATTATATTCTACACATTTTCAAAGGTTAAACAGCAAATGTGGGTCACATGACACAATGCTAGTTTTTCTTATCCAACAAATCAAAGGTCAGCAATGCCTTTATTTATTCAACATCAGTTATAAGCAATAAGAATACAATTTTTGTATTTTGAGGTGATGATAGCAGTGATTCTAGTGCATATTCTGTTATATTTTCTGTTATACCCAATGGCAGTTTATATTTATATGAACTACTACAGCATGCCTATGTTAACAAGACTGGACAGGAAATACTGTCATAGAAATGCTAATAGGCCTACTTAAACAACCAGGTTAAGAAACATAATTGAAATGTATATAAATATAGTAAAATTGAACAGGCCCATACTTATAAAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01384467_01388274.mRNA True 1702 mRNA 0.36 4 1384204 1388927

Neighbor

gene id symbol gene type direction distance location
CI01000058_01364846_01374544 NA coding upstream 9620 1364846 ~ 1374584 (+)
CI01000058_01348684_01352173 NA coding upstream 31616 1348684 ~ 1352588 (+)
CI01000058_01298298_01311989 BMP7A coding upstream 71158 1298076 ~ 1313046 (+)
CI01000058_01280337_01289153 DNASE2B coding upstream 94330 1278592 ~ 1289874 (+)
CI01000058_01266712_01271962 SAMD13 coding upstream 112152 1265753 ~ 1274437 (+)
CI01000058_01391493_01394283 NA coding downstream 2566 1391493 ~ 1394419 (+)
CI01000058_01431719_01434294 CHIA.2 coding downstream 42632 1431559 ~ 1434513 (+)
CI01000058_01496481_01498802 NA coding downstream 105943 1494870 ~ 1499810 (+)
CI01000058_01580247_01591754 NA coding downstream 190736 1579663 ~ 1592253 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 236424 1625351 ~ 1665794 (+)
G247960 NA non-coding upstream 53344 1303301 ~ 1330860 (+)
G247917 NA non-coding upstream 135300 1221593 ~ 1248904 (+)
G248027 NA non-coding downstream 12061 1400988 ~ 1401268 (+)
G248031 NA non-coding downstream 14457 1403384 ~ 1403656 (+)
G248035 NA non-coding downstream 17729 1406656 ~ 1407006 (+)
G248036 NA non-coding downstream 20175 1409102 ~ 1409884 (+)
G247934 NA non-coding downstream 73356 1462283 ~ 1465887 (+)
CI01000058_00592498_00596709 NA other upstream 787033 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 928460 434913 ~ 455744 (+)
G247940 NA other downstream 64070 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 406786 1794468 ~ 1800421 (+)
G250039 NA other downstream 3305481 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3437449 4864571 ~ 4888216 (+)

Expression


Co-expression Network