CI01000058_01496481_01498802


Basic Information

Item Value
gene id CI01000058_01496481_01498802
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1494870 ~ 1499810 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01496481_01498802.mRNA
GTATATAAAACTACAGTGGCAGCTTGTGCACCACCTGTTTCAATTGTCCTTATATGCATCCACACATTTAACGGCACCTCATTTCCTCCCCGTGCCCTGCAGATGGTACATAAGGTGGTGCCAGTCTGGGCCCTGAAGGCCACGGCAATGTATCAAACTCACAAGAGAAAGTGTGTGAGGGCGGAAGACCTGAGAAGACAAACAGCCTCATGTGGACCCACTAGCCCTCCTGTAACTGAAATATCAACATGATAGTCTGTGAGTGTTGACAGCCCGACAAGACGAAATGTCCTGTAATAGCTTGGCTCACTTCATAGAGTATGATGATATGCTTGTCTTTTTGAAGAGGGAAAAGGCTGAAATATGGTGACCTTCAAAAGGCAGATTATAGTCTCTTCTTGTCCCATATCTCAAAAGGAACATTCTTTGAACAGTTTAATTTGAGGAAGAAAAGTTAAACATTGACAGATCTAATTCCTGATTTGTTGTTCTTATTCATGTGTACTCACTAGCCCTCCTGTAACAATATGTACAATATATTGGCACCATATCAGTTATGAACTATTGTTGATAGTGGATGTTTATTTGTTCATGCTCATGTCCCCTACGTTATATTTTCATTACTTTTACCATCATCTAGGGTCGTCAAACGTACAGGTACTACCGGTCAGTACTGAAAAACTGACGCTGACGGTACCAGCATTTCTGCAGTACCGGTAGTACCGAGTACCAGGTATATTCCTCCGATAGACGCTGCTTTCAATTGAGCATCAAAGGTTTCTATATACAGTGTGCTGACCATTGCAGCCAATCACAATCATATCTGATGAACGCGTAAACGCAATGGTCTATCAGAGGTGCTAGTCAGAATTCACTTAACACAGCTGAAAAGCATGAGGTTTTGTTTTGTTCATTCAACACGAGACGCACACTCGCCAATCCTTTCATTATAACCAAAGTGTAAACACAATGTAAATGTAAGAGATTTATTGTACAATCAAGATAGCTTTTTTGACAGCCTTAGTGATTATTAAGGGAGGGCTCTTCTCTTGCTTTCTATTTATTACCCATTCACAATCTCAATACAAATTTAGTTGTTCATGTTGCTAAATACACTGCAAACTGTGCAAAGTTTCTGGATTGACAACCATATTTAAATGCACGACTGAATTTGCAGAACTGCGATGATTGAGTGATAACCAACGGACAAGACAAAACGGGAAGTTCTTAATTCAGCAGTTGGTCTGGTACCCAAATTGGTTCCGAGAATCGTGAAATTTTACTGGTATTGGTACCAACTACTGAAATCAGGTAACCTGACAACCCTACCATCATCTAACTGTCAGGACTCAGGTTTGATCGCTCCTTTTGTTTTCTTTTCTCTTGTTTTGTTTCTGTCTCTTTAACGTGTGACTGTGCTCTGCAATCAGCGCAGCTGCTCGTTATTGCTCGCCTGTTTCTCAATTTCTCTGCTATATCCTTTGTTTCCCTCTGCTCTCTTCTCTGCCAGTGTGTTTTGTGTTTCCAGCCTCTTTTCCCGTTTGGGATCCCTGTTTGATTTGTTTAGTTTTTTTTTTTTTTTTTTGCTTACGTTTTTCTTTTTGTGTTGCCATGGCCTGTGTGCCTGCTAGAACTCTCCGGTCTTGGACAGCTTTCCTGGTTTTGACCATCTTACCCGGTTCTGGAGTCTGGATTCTCTCTCAGTACACTGCGTGCCTGCTTGGACTGTCTTGCGGTTCTGACTATCAGTCTGATCTAAACTGTGAGATGATACTGGGGCGGTGGATGGCCGTACCGAGGGAGAGACGGCAATTACGATGCTCAGTGACTTCAATTGGAGCATGGCATGTTCTCACTGACAGATACGGCATCTGCAGCAGCAATGCCTGGATGAGAACAATGACCACTCTATATCCCAGAAGTGCTCATTGCAGGACACAAAACAGAAGCTCATCTGTACTTGAGCACTTCACAGTAGAGATCAGAGAACTGAGAAACTCCCCAGTCCTCCTCATTTGCCACCTCCGCCCTCAGACACAGGACCATCCATTCTCTCTACCGCCATATCTCAACGAGACCCCCATAACCCAACAGATGTGGAGGTCCTTGACCTTTATCACCCTCTGACAAAGACATCTGACCTTGTGGTCTCTGACCTTCCCAGTGAACTCCCCCTCTTTATTTGATCAGATGTTTTTATTGGCACTCCCAGTGAATGGGTGAACTGCTAAAGGCACTCATGACCTGGATGTGTGCAGTTCAGGGTTAAGTAAGTACACACTCTTATGGATGAATGAGTCTTTCAAATATATGTGATGCTTCAGTTCAGATTCACTTGGCTTCAGTTAAAACTTATCTTCAGTTAGCACATCATCCTGACTGCCTGAGTTCATGGCTTCAATGCTCCTGCTCTCTATAGGATCATTTTTCAGCAGCTGGACAGGAATGTACCAGCTCCTATACTAATCTAATTTCATCTCATATTAACACAGATTCTCACAGTGCTGCGGATGCATCTCATTCTCACTTCATCCATGATCCATAAAAGGGTTACTGGGTTACTTTAGCTTTCTAGAAGTGTCTTTTAGCTACCACTTATGAAATGTGAATATAGAAAGAAGTGTTTAATAATGATATTGTAAAATTATATTTAAAGCAAAAATGTGTAATTATTTCAATTTTAAAATGCAGGGGTAATTATGAGACCTGTTAAAAAAAACAGCCATTTGTTGCCTTACTGAGCTAATTTCTAGTTTAAAAATATTCTTTCTGTTATATTAAATAAATAATTTGACTTGATTAAAACATGTTTAATTATGTTACCACATAAAACACATTTTAAGGGTATTTGACAAAGTATTTGACAAGAGTCATTCAAACACTTCACAACATGAACAAATTAATCATGTGGACTAGCTAAAAGTTTGCCAGCTGCCCAGTTGCAGAAATAGGTTTATTGATCAGAGCTGAATCACAGGTCCTAACCTTGACATTTCAGTAGCAAATCAGCTTGGAAACCATTATTTTTTGAGGCACAGAATATCCCTCAGTTCTTTCAAGTTTTTGGGAGTAAACAGCAAGCAGCGTAGCAACAGATAGATTGAGACAGACTGTTCTACGAGTAGGGACTGACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01496481_01498802.mRNA True 3135 mRNA 0.41 2 1494870 1499810

Neighbor

gene id symbol gene type direction distance location
CI01000058_01431719_01434294 CHIA.2 coding upstream 60357 1431559 ~ 1434513 (+)
CI01000058_01391493_01394283 NA coding upstream 100451 1391493 ~ 1394419 (+)
CI01000058_01384467_01388274 NA coding upstream 105943 1384204 ~ 1388927 (+)
CI01000058_01364846_01374544 NA coding upstream 120286 1364846 ~ 1374584 (+)
CI01000058_01348684_01352173 NA coding upstream 142282 1348684 ~ 1352588 (+)
CI01000058_01580247_01591754 NA coding downstream 79853 1579663 ~ 1592253 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 125541 1625351 ~ 1665794 (+)
CI01000058_01740599_01784355 PLEKHA6 coding downstream 240789 1740599 ~ 1784676 (+)
CI01000058_01794468_01800421 KISS1 coding downstream 294658 1794468 ~ 1800421 (+)
CI01000058_01838039_01842964 NA coding downstream 338229 1838039 ~ 1843230 (+)
G247934 NA non-coding upstream 28983 1462283 ~ 1465887 (+)
G248036 NA non-coding upstream 84986 1409102 ~ 1409884 (+)
G248035 NA non-coding upstream 87864 1406656 ~ 1407006 (+)
G248031 NA non-coding upstream 91214 1403384 ~ 1403656 (+)
G248027 NA non-coding upstream 93602 1400988 ~ 1401268 (+)
G248103 NA non-coding downstream 116766 1616576 ~ 1617014 (+)
G248104 NA non-coding downstream 117541 1617351 ~ 1617920 (+)
G248112 NA non-coding downstream 177047 1676857 ~ 1677153 (+)
G247948 NA non-coding downstream 186969 1686779 ~ 1706383 (+)
G247947 NA non-coding downstream 214474 1714284 ~ 1733492 (+)
G247940 NA other upstream 38423 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 206600 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 897699 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 1039126 434913 ~ 455744 (+)
G250039 NA other downstream 3194598 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3326566 4864571 ~ 4888216 (+)

Expression


Co-expression Network