CI01000058_01680894_01693752


Basic Information

Item Value
gene id CI01000058_01680894_01693752
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1680794 ~ 1694205 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01680894_01693752.mRNA
ACAATCATAGCAATTCTGTCTAAGTTTTAGCCTCCTTAAGCTTTCTGTCCAGGTTTTGCCAGAAACAATTAAGAGGAAATGTTCCAAGGAAGGATTAAACAATGAGATTACACTCTCTCTATGCTCACTTTAATGAAAGCAGGAAATAGTACAGTGCCCATAAATTGGGTCACTCAAACATGACCTGATAAAGGAAATTAAAGATACATAAGTGTTTTTGTTCGCCAAGTCCTCACTACAGTTGATAAAACAATAATCTCAGTAATAACATCATTTTAAAATGGTCCACTGGGTCAGTACACATCTCACTGGTTTTAGGCCGACCAGGTCTGGACTTTCAGTTTTGAGATATTCTTGATCTCACACTTCTGGAAATTACCTAATAAACAGAATCAGCAACAGAAAGGTAGTGGTTGAATTAAGCAGGCTTCCTACGACATATGGCAAGGACTGATGGAGCCTGAAGTGAACCAGACCACCAATTTACGATGCAGGTTAACACTGGAGGTCAATCAATCAAGCTTTATATACTCAACCCGACTGACCGATTGGTCAAGGTTGGTCAGTTGTTTAGCCAAACCATCCAAGGCAGCGCAGTCTTCACACAAATCACAACCAGCATTACCAGCATCAACACAGATCCTACATGCTCCAACCAATGAGAAACAGAGACAAAAGTGCATTTCCTTTGCAAAAACCAATCACACGGCAGATAAACAGAACAGAGTGGCAACACAAACAGATACACTGGGACAGAGAGCTATTCATCCAAATAGCTCTGGTTTGGCAAAGCTCGCACTCTCAGATTTGCTGGGATACTCTGCATGCTGGACAACACTTGATTGGAACAAACCCTGCATTGACAGAACGAGGTGTAAAGAGGCAAAAGAGAACGAAAGACAGACAGGTGGCGGCACTCTGGGGGGGAAAACACAGGCTCGAAACCCATCTGGTGAGACCCAAGCATCTGTAATCACGGACAACACCCCAAAAATGATGAGGACCAACCAGATCAAAGCGTTCAGCATTTTGGACAGGATACCTACAACAATTGGTATACAGCGCCCTCTAGCGATAAACTGTATACAGTGTTCTCTATGGACAAATTCTACACAGCGCCCTCTAGTGATGAACGGTATACTGTGCTCTCTAATTACATATTCTACACAGCGCCCTCTACTGACTGGTAAAGAAATAATCAAAAATCAAGAAGACATCATCACATTATGCTGTCCAGCCAAGGAACCAGAATCAGCTATCATGTGGGTGAAAATATGGAATCTTCAGGATAACATTATTCCGTCCGTCGAATATAATCCACAGCCTGATCAGGCCTCGGTGCTGAGTGATGATGTTGAGATTGGAATACTAGCGTGCCACAGCACTTTTGAATACTGTGCACTATACTGCCAACTACTTCAGTAGCCCACATGAAAGAAAAAAAATGTGAAACGGTAGGCGTTATTCAAAATCCAAGCTTTTAACAGCAGTGTGCTACTTTGTCACATGGATGCACAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01680894_01693752.mRNA True 1525 mRNA 0.42 6 1680794 1694205

Neighbor

gene id symbol gene type direction distance location
CI01000058_01528111_01564969 NFASC, NFASCA coding downstream 115825 1527499 ~ 1564969 (-)
CI01000058_01510773_01517931 NA coding downstream 161612 1510350 ~ 1519182 (-)
CI01000058_01462558_01465691 CHIA.1 coding downstream 214665 1462523 ~ 1466129 (-)
CI01000058_01453383_01456154 CHIA.2 coding downstream 224510 1453084 ~ 1456284 (-)
CI01000058_01418324_01423047 NA coding downstream 257267 1417497 ~ 1423527 (-)
CI01000058_01694694_01723697 NA coding upstream 474 1694679 ~ 1724208 (-)
CI01000058_01807681_01819809 NA coding upstream 113466 1807671 ~ 1819809 (-)
CI01000058_02049299_02051461 LRRN2 coding upstream 355084 2049289 ~ 2051809 (-)
CI01000058_02100559_02106600 NA coding upstream 405813 2100018 ~ 2106652 (-)
CI01000058_02192060_02196086 NA coding upstream 497591 2191796 ~ 2196086 (-)
G248958 NA non-coding downstream 57841 1621013 ~ 1622953 (-)
G248955 NA non-coding downstream 63140 1617451 ~ 1617654 (-)
G248943 NA non-coding downstream 70977 1605938 ~ 1609817 (-)
G248916 NA non-coding downstream 182577 1446661 ~ 1498217 (-)
G248914 NA non-coding downstream 245865 1431615 ~ 1434929 (-)
G249014 NA non-coding upstream 61756 1755961 ~ 1768102 (-)
G249024 NA non-coding upstream 96529 1790734 ~ 1791212 (-)
G249077 NA non-coding upstream 129809 1824014 ~ 1824332 (-)
G249078 NA non-coding upstream 131070 1825275 ~ 1825552 (-)
G249082 NA non-coding upstream 135237 1829442 ~ 1829792 (-)
G247592 NA other downstream 1025845 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 1164278 2858483 ~ 2861491 (-)
G250230 NA other upstream 1994438 3688643 ~ 3696711 (-)

Expression


Co-expression Network