CI01000058_01694694_01723697


Basic Information

Item Value
gene id CI01000058_01694694_01723697
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1694679 ~ 1724208 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01694694_01723697.mRNA
AGTATTGTCATTTAATTACACAGTAGAAGGGGCTTAGAAATGGATGAGGAAAACTGAAAAAGGTCAAACTACTCCACAGACAAGTGACATGGCAGCCTAGATCACTCACAAGCCAATGAGATTGGTCTTGGGCCATACAGCAGAAGTCCTATTTGTGCATCTGTTCTTGTGTCAGGTCAGAGAAGAAATAGGCCAAGCTACAACAGAGACAACAGATGCCACTCCTAGATAACCTACTATAGTAAAATTCCAGTGGAACATGAAAGATGATGACACTTGAACTCAACAAATATGCATTACTTCCGTTTTATACTGGGTAAGCACGTGCATGTCCACATTTCACGTGAGATATGTTGATAAGATTGCCTGACATGCACCTTGTGGGTAATGGCATTCAGACACGTACGATACATTGAAATGATACGTTCCTGACACTCCTGAAGCCTCAAGCAGCACTTCAAAGCACCTGAAGCACACTCGTTTTTTTCCCCTGACAAATCCTTATTGAAGGATGAGACGTACTCACTCGCACACACTCACACCAGCTGGAGAGGGGCGTTCCCAGAACATTCCAGAGCACAATACCACCTCCAATGGGCAAAACACATTTCTTTCCTCACTTGTTCCTCGTCGACACTCTGGCTGCCTTCTCGCAAACATTTTAGGTTCAAGACCAGGGAGGCAGGCAAAACAGACCACAACATCCAAAAACCCAGCTGGCTCTCAACAGGATGAGTATAAATGCGGATTTTGTCTTTTAACGGATTCTTGTCTCATGAAAAAACATCTGACTTATGAGAGAATGGAGGGAAAATACCATGACAACTTCTTTGTTCAAGTAAAACAAGTCTATTGTTACTGGATCTTCGCGGCTCTGCGGAGGTTGCGCATTCCCCTAGCTGCCGCTCCTTTAATTCTCTCTTTCTCATCTGGTTTTACCTGGTCTAACAAAACAAAAAGACACAAGAAAGACCTCTTTCTCCCACAGAAGGTGACCAGGAAACCATCCATTGACTTTAATGGCTCTGAAGACATGAGAGCAGGCTCTTTTCCCATGCCCTATCAGCAGAGCTGTGGTAAATCAGGACAGATGAGCAGAGACCATTCAGCGCCTGACAGAGATGAGTTTGTAAGGGAGAAGGACATGGGCTGCAGTCGAAACAGGTTTCTAGCTATTGCAAAGTCACTACATGCTAGTCACGTCAAGGAAGCACGGCAGAGATTAGAGCAGATTGTGTCAGACATCTGCCGTGACGAAAACACTTGGCACGTGGCAAGGAGGCTGCCACAGAGAAAAGAGAGCTTAACAAAAGGAGGCAATCACAGCATGGGGCTTTGTGTGGAAGTGGAGGAAGGAAATCCTTCTCTTCATGAGATTGTGGGCGGCCAGATGAATGAAGAAAAACAACACAGGATTGAGAGCGAGACTGTGAGAAAAAAAGGAAATAATCTTGGCTTATCGCAGTCTAAATACGAGAGTCAATGAAAAATGTGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01694694_01723697.mRNA True 1501 mRNA 0.45 6 1694679 1724208

Neighbor

gene id symbol gene type direction distance location
CI01000058_01680894_01693752 NA coding downstream 474 1680794 ~ 1694205 (-)
CI01000058_01528111_01564969 NFASC, NFASCA coding downstream 129710 1527499 ~ 1564969 (-)
CI01000058_01510773_01517931 NA coding downstream 175497 1510350 ~ 1519182 (-)
CI01000058_01462558_01465691 CHIA.1 coding downstream 228550 1462523 ~ 1466129 (-)
CI01000058_01453383_01456154 CHIA.2 coding downstream 238395 1453084 ~ 1456284 (-)
CI01000058_01807681_01819809 NA coding upstream 83463 1807671 ~ 1819809 (-)
CI01000058_02049299_02051461 LRRN2 coding upstream 325081 2049289 ~ 2051809 (-)
CI01000058_02100559_02106600 NA coding upstream 375810 2100018 ~ 2106652 (-)
CI01000058_02192060_02196086 NA coding upstream 467588 2191796 ~ 2196086 (-)
CI01000058_02198525_02205429 NA coding upstream 474288 2198496 ~ 2205437 (-)
G248958 NA non-coding downstream 71726 1621013 ~ 1622953 (-)
G248955 NA non-coding downstream 77025 1617451 ~ 1617654 (-)
G248943 NA non-coding downstream 84862 1605938 ~ 1609817 (-)
G248916 NA non-coding downstream 196462 1446661 ~ 1498217 (-)
G248914 NA non-coding downstream 259750 1431615 ~ 1434929 (-)
G249014 NA non-coding upstream 31753 1755961 ~ 1768102 (-)
G249024 NA non-coding upstream 66526 1790734 ~ 1791212 (-)
G249077 NA non-coding upstream 99806 1824014 ~ 1824332 (-)
G249078 NA non-coding upstream 101067 1825275 ~ 1825552 (-)
G249082 NA non-coding upstream 105234 1829442 ~ 1829792 (-)
G247592 NA other downstream 1039730 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 1134275 2858483 ~ 2861491 (-)
G250230 NA other upstream 1964435 3688643 ~ 3696711 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004128 plekha6 coding NC_007122.7 CM002895.2 23342996 ~ 23525611 (-)