CI01000058_02192060_02196086


Basic Information

Item Value
gene id CI01000058_02192060_02196086
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2191796 ~ 2196086 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_02192060_02196086.mRNA
TAAACTGCAATCACAGCGGGAAAGAAACAAGAGCAATAAGAAGAGTGAAAATGAGGAAATGCACAGAGTAAAGAAGATCCGACACATTGAAGAAGTGCCGCTTGATAAAGAACAACAACAACAAACACAAATTTCATTTGAACTCTTTGAAGCACTTGCAATGCCTGATCATCCAAACTCCCTTCCGAAAGAGATCGCCCTCACCATCCTGGCGATTAAGGTCGTTGCAAAGGCCACTCCAGTTGCTGTCTCTCGTGCAGCTTGGCGTCTTGTGGGCTGCAATGGGAGACGCATCCATCCCTCCTCTCACCTTTGTGTCTTGCGGGGCAAGCAAGTCTTACGCCTTGGCTTGAGGGAGCAGTATTTGCGTCTGGCGGTACTGCTCCCGGAGGGATATGTACATACTTCTTTTGGTTGCCCATCATGGCCACTCCGTTCCCGAGGTTTCTGCCACAGCTGTCTAAATGCCAGAGTTGTCTGTCTCCACCTCCACAATGTCAGAGCTCCCTTCTTGACCACCTTGATGCCAGCCACAGCTACTAAAGAGGTTTCGTTATGGCTGCTCCACACCTGTCTGACAATGCTAGTGCTCCCAGCCATGGCTACACAGCAAGTCCTACCTCAGGCACCCCAACGGTGTCATTGTCTCCACAGATGTTCCTGCAAAGGCCCCAGCCAGAGCAAGCACCAAAGGCTAACTCAGCCACTCTGGTTTCAAAGCTCCCAGTCATCTCCGTCCAGGCCCAGAGGTTTCTGTCATGGCCTCCTGATTCCAGATATTCCAGTCATTACTGTAACCTCAGAGAAGTGCCAGTTAGTGCCACCTAAGAGGTTCCGTGGCCATTGGTTTGCCAGTGGTTCCTGTTACGGCTGCCACAGAAGGTGCCTTCATGGGCGGCCCCATCGCCAAACTCTCTGCAATGTTACCTCGGCCCCAGAGCTCCCTGCTATGTCTTTCCATCCTCAGAGATTCCTGCTATGGCCACTTGAAAGGTTTCTGCGATGGTCACCTCATGTCTGCTCAGTCCAGTGGGTCCAGTCACTTAGAGGTTCTTGCCACTGCCAGCCCATTTTCCTTGTCATGGCTGCTTCAGAGCTCTCTGTTTCAACCGCCCCGATGCCAGTACTCCCAGTTTTGGCAGCCCCAGTGATTCCTGCCACAGGCTCTCCAAAGGCTCCTGTTGTTGTCTCAATGTCGTCTCAATCCCAGATATCCTCATTGGCCATCCTGGTCTCCAAGCTTCCTGTTATGGTTCCTGTCATGACTGCCTTGTCCTAGAAGTACTTGTCACGGCTGCCTCAGTGGCTGTTTAAATGCCAGATCTCGTCTGTCCCAGTGGCAGGTATTCATGTCATGGCTGCCCCAGATGTACCTGCCACAGCTCTCCAGGTATAAGAGCTCCCCATTTCATCCACCCTGGTGTCAGATAAAAGTAATGCATTCTTTATATTTGAACAAATGATTAATAATGATTTTGTAAAAAGTACTTTTTAGTAAAAGAAAAAAAGAAAAAAAAAAGAAACATGGATCTTACACAATAAA

Function

NR:

description
hypothetical protein cypCar_00007329

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_02192060_02196086.mRNA True 1543 mRNA 0.50 5 2191796 2196086

Neighbor

gene id symbol gene type direction distance location
CI01000058_02100559_02106600 NA coding downstream 85144 2100018 ~ 2106652 (-)
CI01000058_02049299_02051461 LRRN2 coding downstream 139987 2049289 ~ 2051809 (-)
CI01000058_01807681_01819809 NA coding downstream 371987 1807671 ~ 1819809 (-)
CI01000058_01694694_01723697 NA coding downstream 467588 1694679 ~ 1724208 (-)
CI01000058_01680894_01693752 NA coding downstream 497591 1680794 ~ 1694205 (-)
CI01000058_02198525_02205429 NA coding upstream 2410 2198496 ~ 2205437 (-)
CI01000058_02207230_02214219 NA coding upstream 10183 2206269 ~ 2214219 (-)
CI01000058_02235326_02347093 PPFIA4 coding upstream 39240 2235326 ~ 2347799 (-)
CI01000058_02366247_02370447 NA coding upstream 170140 2364878 ~ 2370756 (-)
CI01000058_02463470_02484038 MDFI coding upstream 266219 2462305 ~ 2484038 (-)
G248999 NA non-coding downstream 104643 2071732 ~ 2087153 (-)
G248979 NA non-coding downstream 152656 1982037 ~ 2039140 (-)
G249003 NA non-coding downstream 193094 1995005 ~ 1998702 (-)
G248994 NA non-coding downstream 206411 1984163 ~ 1985385 (-)
G249118 NA non-coding downstream 268762 1921931 ~ 1923034 (-)
G249183 NA non-coding upstream 101479 2297565 ~ 2309005 (-)
G249186 NA non-coding upstream 119494 2315580 ~ 2321692 (-)
G249213 NA non-coding upstream 167295 2363381 ~ 2364654 (-)
G247592 NA other downstream 1536847 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 662397 2858483 ~ 2861491 (-)
G250230 NA other upstream 1492557 3688643 ~ 3696711 (-)

Expression


Co-expression Network