CI01000058_02558119_02571796


Basic Information

Item Value
gene id CI01000058_02558119_02571796
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2558028 ~ 2573230 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_02558119_02571796.mRNA
AATTATGGCTTTATGGAGCTGATTTGCCACGTCTGTCCAAAGTTTAGTAACATGTTTTTATATGCTTTCACTTGAGGCTCTTTCGCCCACTTTTTCTCCTGCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCACCACCGCACTACATGTGATAATTACCCTGTAATATGGAATGGCAAAGAATCCTCCAGAGAATGGAGATGCATTCATCATCATCCATTTATTTAAATACCATAATTTACTGTACGGCTCATTACTGGGAGGTTGACCTTTCCCAAAATGAAGATCTCCTCTATACTTTGTACTCACTGCCTGGTTTCATTTTTTTTTTTTTTTTTAAATTCTAAAAATGCTAATAGAGATAAATACAAAGGAGGTGATGAAGGGTGTAGCATCCATCCCTCCCTCCCTCCATCCATCCATCCATCCAATGAGCAAATAAAAAGTGCATTAAAATCATTGCGATATTTATGATGCTTCCTAATTAAATATTGTCAGTCAAATCATTCCAAATATATCATACATATTCAATTATTTAACACCAGGTGCAACAAGCATTGATTCACTTGCAAGACGTACCACAACTCCCAAATATATTTTTAAATGGCAAATAATTTGAGTGGCCACTTCATTAGAGCAGAAACATCACAACTTATCATTGAATGCATTGAGACGCTCCATATATCCAGACTAATGGAATCAGATTGAATCTAGGAGCACAGGTGAAACATTTTGCAGGGAATCGCCTACAAAATGCTTTTAAGTGCGGATGGTTTTAGTTTAATGAAAGTGAGTCATTTGGCAGACTGACAGTATATTGTGCTGAGGAGGATTTCGTATTAAAACACTCTCTCTTGTTCCGGTTCAGACCCCACATAAACTGCACAATGTCGGGCTCTGGCCGCAGGTCTCTCTGTAGGTTCACAAGAGATTCACATCATCGTCCTTGTGTCTGTGTTTTAATGAGCGGAGGGGTTGATAAGACTGATTGTAATTTATCAAGGCCAGAAAAAAAGGAAAAGCCAGAATAAGGCTCATTGGAATGCATTCTCTGTCCTTACTACTTCCTTTATGACCCTCTGGGACGCATCGCTCTTCTTGCGGCTCGGCTTCCCTCTCCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCCCTCATTTCCCATCTCTTCTCTTTGTTAATCAGTTAAACTCGCTCTTCAAATAGCCACTCTAATTACTGCTCCGCTCCCTGCGAACGGCCATCTCCCCTGCTGCTCTCTCTCTCTCTCTGTATTGAAGCTGACCCCTGTCAGTAGTGGGTAGCTCTTCGTGGTGCATGCGGACAGTGCTGGTGAATCTTAATGGTGGTGGGAGGCTCCAGAGGTGCCACTGAAGCTGGCTCATTAGCAGACAGTCTCAGAAGCTTGTGGAGATGGTTTTAGGGGATGGCCATCAAATACACACCATATATTATGCGCTCTCTCACAGACAGATGCATTCAGATGCCGTGCCACTTACAAACTCAAAGCTGCGGGTGCCAGTGTCCATGGCAATGATGACCCCACAGATGATAACTCCTCAGCAGATGCAGCAGATCCTCTCTCCGCCTCAGCTCCAAGCTTTACTCCAACAGCAACAAGCCCTTATGCTGCAACAGCTGCAAGAGTACTACAAGAAGCAACAGGAGCAGTTGCACCTCCAGCTCCTTACCCAGCAACAGCAAGCAGGGAAGCAGGCCAAAGAGGCACTGGAGGAGGAGAAGGACCTGATCTGGGTAATGAAGGTGAGGGGGAATCATGTTGGATCACTGAGGATAAGACTGCAGCACAACAAAGGCGAGGGCATAATCACCCGTCTGCGCACTGCGGGAGAGGAGATCTGCGCTAATCTGGCGGTCAAATGAAATCCAAACTTTTGCGGCCTGTGTGTCAGTGGCGTGAGCTATATCTGATACAACTTAATCAAGGAGTTTCTGCAAGGACTTAATGAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_02558119_02571796.mRNA True 1996 mRNA 0.44 4 2558028 2573230

Neighbor

gene id symbol gene type direction distance location
CI01000058_02548351_02550351 NA coding downstream 7480 2548010 ~ 2550548 (-)
CI01000058_02507677_02545533 FOXP4 coding downstream 11615 2507594 ~ 2546413 (-)
CI01000058_02463470_02484038 MDFI coding downstream 73990 2462305 ~ 2484038 (-)
CI01000058_02366247_02370447 NA coding downstream 187272 2364878 ~ 2370756 (-)
CI01000058_02235326_02347093 PPFIA4 coding downstream 210935 2235326 ~ 2347799 (-)
CI01000058_02859435_02860658 FAM72A coding upstream 285993 2858483 ~ 2861491 (-)
CI01000058_02863488_02874502 NA coding upstream 290027 2863257 ~ 2874660 (-)
CI01000058_03112748_03117231 IL10 coding upstream 539002 3112232 ~ 3117231 (-)
CI01000058_03128328_03131680 NA coding upstream 555045 3128275 ~ 3131862 (-)
CI01000058_03136045_03137264 PRELP coding upstream 562469 3135699 ~ 3137264 (-)
G249028 NA non-coding downstream 102824 2454798 ~ 2455204 (-)
G249248 NA non-coding downstream 112917 2444792 ~ 2445111 (-)
G249238 NA non-coding downstream 125367 2432448 ~ 2432661 (-)
G249237 NA non-coding downstream 125947 2431863 ~ 2432081 (-)
G249222 NA non-coding downstream 147694 2410000 ~ 2410334 (-)
G249029 NA non-coding upstream 53044 2626274 ~ 2628453 (-)
G249277 NA non-coding upstream 57930 2631160 ~ 2638355 (-)
G249287 NA non-coding upstream 90679 2663909 ~ 2664147 (-)
G249294 NA non-coding upstream 100173 2673403 ~ 2673652 (-)
G249296 NA non-coding upstream 103820 2677050 ~ 2677266 (-)
G247592 NA other downstream 1903079 646443 ~ 654949 (-)
G250230 NA other upstream 1115413 3688643 ~ 3696711 (-)

Expression


Co-expression Network