CI01000058_02578534_02589495


Basic Information

Item Value
gene id CI01000058_02578534_02589495
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2578061 ~ 2590541 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_02578534_02589495.mRNA
ATATAAAAGCCCATTATCGACCGCGTTCATTACACTTTTCACTCATGTTTCAGATCAAAAAATGGACTTTTACACTCCACTGCTCAAACCCAAACTCTGAAACGGCCAGCACGGCCCTGGGTGTTTCTCTTCTTGCTCTCTCTTTCTCGCCGTCTTCAATCTGTCAGGCCTCTTGCATTCTGGGTCACCCTCTCTAACCCTCTCTCTTTTCAAAACAACCTCTTTGAAAAGGAAAAAAAAAAGTGCCAACTAAGCATTTCCACTTAATGGACAAAACAGAGTTTTCAAAAATAAAAGTTCACAAAAAAAGGCTCCGTCCAGTATGGATGGTCTTTTTGTCCCCCATTGATCCGAGGTGTCTATATACGTGTCACTTTCCAAAAAACGGCAAAGAATTCTTATCAAAACCTGCTGTAAAGTGGCTATTTGCATGATAAGCGCTGCATTGTGTTTTACCGCGATAAAGAACAAACATGAGAGGTAAATTTTCATTAGGGTCAAAGGACTTTCAAAGTTCATTCTGTAAAACTGATCCCAAAGTGCTTGACCACACTGAGGTGGAGGTTCCAGCTGGCGTCAGCCATCTCGCCATCGGATCATCTCAATGTGGTGGGCTAAAGCAGGCAGTTATCGCCACTGCCCCAATTCAACATGGCAGGCATGAAGACTGTATTTCTTACCAACAGGCTCTGTTTGACCTCGTTGCTGCTGGGGGAGTTGAGTCCTGTGGCCTGCTGGAGGATGAACTGGCGTGCTGCCTGGAGGGCCTGTGGACACGAGAAACAGAGACAACACAGCGGGCCAGAAAGGGACCTTGCTTTCTCTTCAGACTGCGAGAGGGAAAATGCAACTCTGTAACTCTACCGCACCCTTTTTTTCCTTTCTCTCACACTCCCTTAGATCATCTGTCCATTGCGCTGCCACTCCGAGGCCCGTCCCACATCATGTGGCAACGGTTCGCTACCCTACGTACAGATGACGGCAGTATTCGTTTAGATTTTTCAAACTGTACCCGCACAGGATCTTTGGCCCAATGGCAAAATGCGGCTCTCAAAACAAAAACACTAGGCAACAGTAAATCAGTGGGCAAACAGCTTTTTGAAGAGCGCCATCAGGATGCACATTTGCTTCCTGGCCCTGAAGAGAGAGAGGAAGAAACGAGCTGCTCAGATATTCTGCCTAACATCTCATTTTGTCCTGCACTGAAAAAAGAAGTAATGTTTGAAAAAGAGTTTGGGATGTCATGGGGGAAAATAAATGACAAAAAAAGAGGAAATTTTGGGGTGAACCTCTACTTTAAGGAGAAAGGCACATTACCTAGAGAAGAACAAGTGGTCAGCACGGCTGGTCTTAATCACGATGCTCTAAGATCAGCAGTGGGAGCGGAGGCCAGTGGCACTAAACTGGCCCAGAATGAGAGCGACTGGGGAGAGAGGGAAAGAGGGGGGCCTTCGGGTGAGGGTCCATTATGGGAAAATAACAGGGAAGAATTCGTTTTGGCATACGCGCGTAGTGCGACTCGCTCTCGTTCTAGCAAAGTTGTGACAGTCGCGTCCGTGCGCACAGACGTGACAGCGTCCAATAATAATACGGCAGATGAAATTTTTGAGCCGCTCTAGGACGGACGTTCCAAAACAACGCGGTAAAACACACAAACAGGGGTGATTGCGCGCCTCTTTCCTGGATGTCCCAGCTCCTATTCATTACGGTCAGGTTGCTTAAGTAAACACGACTGGGAGGTGATGAATCGGAGCCCTAATCCGCCTGTGTTTGTGGGAGTGAGAATGAGGGAGAGGGCAGAACACGGGGCGCTCGCTCGCTTTTTCTCTCTCTCCTGTAAATCTAAACAGTGAAGTCGGCTCCTCCGCGGACAGGTGGGCACCATATGCTGGAATGATCCATCATCACTGACAGAGAGCCATTGTTGACGCCTGCAACGTCCCCCCGCAACCGCCCCCGTAGAAAAACAGAGCCCACGGTGGGCTGTCCATGGGTGTGGGTGGGGGGGATGGCGGTGGAGTGGTATGGGGGCCAGGGTGGCATGAAGGGTCAGAGGGAATCATGTTACTGGAGTTGGCGGATCCAGAGCTGAAGACAGACTGAGACTGCCACTGTATGCTGGGAGAAACTCAGGAGATACTGATGGGGATGAGGGTAGAAAGAGGCGGGAATAGGGAATGAGACTAACGTATATACATAAAAGAAGAAAAGAGAAGGGAAAAATGAAATAAAACAAAGAAAAACTAATGAAAATACAAATAAAAAACAAACATGAAAAAGTATTGTTTTAAAGAACAAATGAATGTGGACAGTGTACACAGTCTTAAAGTAGATATGGTTGAGATCTCTTCTGAAACTTGAGACACCTGTGAGAGTCTCCTGCTTAGATGTTTCTCCTAGAATGTAATGAGATTAAATAGAAAAAAAATCTGAGATATTAAAGAGATGTAATTTTGTCTTTCCTACAGGCTGGTCTACATTAGCTTTATGAAACAACTGCTGGCCACACTCGGCCAATCATACCCCTGCCTCTGTGCTGACCTCCAATCAGAGTTAGATATGATGTGCAGTTATTTATAGTTGGCTAGTGAGGACCCTTTTAGAAGAGGTCAACAAAGTAACAGTGGTGGCCTCCCGTGGCGCTGCGTTTTTAATTCATTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_02578534_02589495.mRNA True 2665 mRNA 0.47 6 2578061 2590541

Neighbor

gene id symbol gene type direction distance location
CI01000058_02379628_02392648 NA coding upstream 185281 2378584 ~ 2392780 (+)
CI01000058_02348646_02354404 TMEM183A coding upstream 222976 2348615 ~ 2355085 (+)
CI01000058_02227590_02229507 MYOG coding upstream 348040 2227418 ~ 2230021 (+)
CI01000058_02052152_02085378 NA coding upstream 492606 2051963 ~ 2085455 (+)
CI01000058_02028188_02037502 MDM4 coding upstream 540433 2028149 ~ 2037628 (+)
CI01000058_02592534_02600835 NA coding downstream 652 2591193 ~ 2601755 (+)
CI01000058_02629861_02631891 NA coding downstream 39149 2629690 ~ 2632294 (+)
CI01000058_02635467_02636768 NA coding downstream 44635 2635176 ~ 2636985 (+)
CI01000058_02650808_02653235 NA coding downstream 59895 2650436 ~ 2653371 (+)
CI01000058_02883775_02884290 NA coding downstream 291623 2882164 ~ 2885704 (+)
G248432 NA non-coding upstream 77744 2500110 ~ 2500317 (+)
G248406 NA non-coding upstream 116513 2460916 ~ 2461548 (+)
G248405 NA non-coding upstream 118664 2459047 ~ 2459397 (+)
G248404 NA non-coding upstream 121476 2455687 ~ 2456585 (+)
G248384 NA non-coding upstream 161580 2416253 ~ 2416481 (+)
G248516 NA non-coding downstream 82834 2673375 ~ 2673662 (+)
G248519 NA non-coding downstream 94734 2685275 ~ 2685634 (+)
G248574 NA non-coding downstream 276681 2867222 ~ 2878788 (+)
G248566 NA non-coding downstream 300810 2891351 ~ 2908197 (+)
CI01000058_01794468_01800421 KISS1 other upstream 780329 1794468 ~ 1800421 (+)
G247940 NA other upstream 1121614 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 1289791 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 1980890 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 2122317 434913 ~ 455744 (+)
G250039 NA other downstream 2103867 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 2235835 4864571 ~ 4888216 (+)

Expression


Co-expression Network