CI01000058_03154548_03160071


Basic Information

Item Value
gene id CI01000058_03154548_03160071
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 3154539 ~ 3160071 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_03154548_03160071.mRNA
ATGGATATCAAGTCAATTTTTTTGTTACTCTCTGTGTGTGGGCCGACTTGGGCCTTCACGTTGGACTTTGACTATGGAGGCGTACCACTCTGGATCAACCGTTTTTTGGGAGAGCCGAGTGTGTTGACTTTGAAAGATCGAATGGATCCAGGCTGGTTTCGTGCTGTGAATGCACAAAGTTGTCCCTTGGAGTGTGACTGCCCGATCCAGTGGCCAACAGCCCTTTATTGTGACCACAGGAGCCTTAACCAGCTTCCCTCTGGCCTTCCATCCCGCACACAGTACCTGTTCCTCCAAGGGAATGATATTACTTTCCTTGGAACCGGAGCGTTCGCCAACACCACCAACTTGCGCTGGTTGATCTTGGATCACAATCAAATACTGAGTGAGCAACTCGATAATGTGTTGTTCTCCAGTCTGACCCACTTGGTATATCTTTTCATAAACCATAATAACCTGAAAAAGGTGCCAGCCGGACTGCCTAGCGGACTCAAGCAACTGCGACTCGCATATAATCACATCGAAAAGATTTCTGCAGGTCTTGGAGGCCTCAACCTCTTGGATCTCAGTCACAACCTCCTGGATACTTTCCCTAAACATCTGCCTCCATCTGTCCAGCAGCTTTACCTCTCCAACAACTCTCTGACTGGCCTGACCGAGAACAGCCTTCATGGTTTTAATGGACTCCGTTACCTACGGCTCGGACACAACAAATTGAGGAATGAAGGGCTTGACCCTGGCGCCTTTAACTTCACATCTCTGGTAGAGCTGGACCTTTCATATAACCAGCTGAAAGAAATCCCAACAGTTCCCACCACCCTTCAATACCTCTACCTTGAGGTTAACCATATCCAAGAGTTCAACGTGAGCAGTTTCTGCAGGACAGTAGGACCCACATCATATTCACGTATGAAGATCCTGAGGCTAGACGGTAATAAATTGGAGTATCACAAGCTGCCTCCTGATTGGGTGTTCTGCCTACGTGTCCTCCATAACATTTATATATGATCTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_03154548_03160071.mRNA True 1017 mRNA 0.47 3 3154539 3160071

Neighbor

gene id symbol gene type direction distance location
CI01000058_03136045_03137264 PRELP coding downstream 17275 3135699 ~ 3137264 (-)
CI01000058_03128328_03131680 NA coding downstream 22677 3128275 ~ 3131862 (-)
CI01000058_03112748_03117231 IL10 coding downstream 37308 3112232 ~ 3117231 (-)
CI01000058_02863488_02874502 NA coding downstream 279879 2863257 ~ 2874660 (-)
CI01000058_02859435_02860658 FAM72A coding downstream 293048 2858483 ~ 2861491 (-)
CI01000058_03239666_03330001 CDH4 coding upstream 79595 3239666 ~ 3330003 (-)
CI01000058_03668662_03671701 FEZF2 coding upstream 508475 3668546 ~ 3672185 (-)
CI01000058_03684461_03827727 CADPS, CADPSA coding upstream 524390 3684461 ~ 3827727 (-)
CI01000058_03904018_03906800 THOC7 coding upstream 743826 3903897 ~ 3908108 (-)
CI01000058_03950901_03956376 PSMD6 coding upstream 790830 3950901 ~ 3956376 (-)
G249548 NA non-coding downstream 2707 3151438 ~ 3151832 (-)
G249529 NA non-coding downstream 4167 3149992 ~ 3150372 (-)
G249546 NA non-coding downstream 7867 3146285 ~ 3146672 (-)
G249543 NA non-coding downstream 10406 3143906 ~ 3144133 (-)
G249542 NA non-coding downstream 10942 3143345 ~ 3143597 (-)
G249549 NA non-coding upstream 2543 3162614 ~ 3162827 (-)
G249512 NA non-coding upstream 18533 3178604 ~ 3180979 (-)
G249567 NA non-coding upstream 34011 3194082 ~ 3194740 (-)
G249573 NA non-coding upstream 39568 3199639 ~ 3199855 (-)
G249560 NA non-coding upstream 70486 3230557 ~ 3231054 (-)
G247592 NA other downstream 2499590 646443 ~ 654949 (-)
G250230 NA other upstream 528572 3688643 ~ 3696711 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location