CI01000058_04272001_04275349


Basic Information

Item Value
gene id CI01000058_04272001_04275349
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4271906 ~ 4275431 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04272001_04275349.mRNA
CTATATAAACTTTGGAGGGGGGACTGGATTTTTAAGCATTACTCTGATAGTAATAAGGATTATATTTAGCACAAATCTCAGTAATTGTTAAAAATATGCAGTCTCACAGGTTAAAAACCCAGTGGCGACGACGTACGAATACAGTGCGACAAATACAACCAGAGAGCGTGCTGCTGCTCTGCTCTGTAGATCCATGTGTCCAAGATTCTGTGTGGAAAAACAGCTCTACACTGCCCTCTCTGTTTCCCTCCATTACGCCTGGCCTGCATCACACTGGGCCCTGTCACCATGGCAACGCTGGTCAGAGCAGCACTCATCCAGCTTTGGCGTTTAAGTGTGCTGCCCCCTACTGGTGGTTAAAGAAATCACTGAGAGTTTCTGCAGCAGGTGCTGAACGGCACAAAACCAAAGAAATGGACAACAGCAGCTGGGTGCACTCACAAGTCAATATGGCACCCCTCCACGCAACCAACACAGACTTCAGGGGTGTGGCACCACGCCAGCCATGATAACAAGAACCCTACCAACCTGTCTCTCACTCTCATTCAGCCACAATGGTTTTTCATTTTGCTGATGCAACACAATAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04272001_04275349.mRNA True 591 mRNA 0.47 4 4271906 4275431

Neighbor

gene id symbol gene type direction distance location
CI01000058_04263520_04265153 NA coding upstream 6278 4263124 ~ 4265628 (+)
CI01000058_04174884_04175951 RHOL coding upstream 95076 4174800 ~ 4176830 (+)
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 306308 3959155 ~ 3965598 (+)
CI01000058_03915537_03946197 ATXN7 coding upstream 323833 3914922 ~ 3948073 (+)
CI01000058_03889526_03896649 SYNPR coding upstream 375151 3889314 ~ 3896755 (+)
CI01000058_04303891_04308850 NA coding downstream 28373 4303804 ~ 4308997 (+)
CI01000058_04344622_04358133 NA coding downstream 67590 4343021 ~ 4358133 (+)
CI01000058_04360496_04365634 PFKFB2, F262 coding downstream 85065 4360496 ~ 4366118 (+)
CI01000058_04405407_04408449 ID1 coding downstream 129976 4405407 ~ 4409395 (+)
CI01000058_04466648_04523385 ZMYND8 coding downstream 190765 4466196 ~ 4523483 (+)
G249899 NA non-coding upstream 31011 4240237 ~ 4240895 (+)
G249886 NA non-coding upstream 53137 4217928 ~ 4218769 (+)
G249873 NA non-coding upstream 100814 4170590 ~ 4171092 (+)
G249869 NA non-coding upstream 117415 4154247 ~ 4154491 (+)
G249839 NA non-coding upstream 155514 4115652 ~ 4116392 (+)
G249970 NA non-coding downstream 65341 4340772 ~ 4340984 (+)
G249981 NA non-coding downstream 88276 4363707 ~ 4413637 (+)
G249980 NA non-coding downstream 142494 4417925 ~ 4418264 (+)
G249979 NA non-coding downstream 144917 4420348 ~ 4420792 (+)
G250013 NA non-coding downstream 176096 4451527 ~ 4452571 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2474174 1794468 ~ 1800421 (+)
G247940 NA other upstream 2815459 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2983636 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3674735 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3816162 434913 ~ 455744 (+)
G250039 NA other downstream 418977 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 550945 4864571 ~ 4888216 (+)

Expression


Co-expression Network