CI01000058_04405407_04408449 (ID1)


Basic Information

Item Value
gene id CI01000058_04405407_04408449
gene name ID1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4405407 ~ 4409395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04405407_04408449.mRNA
ATGAGCGAGTGGAGGGGCGCTCCAGACTCGTCGGCTCCAGCCGAGATTCTCTCTCACAGTCCCGATACTGCACTCCCATTGTTCAGCTCCTCCTCCGCCTCCCCTCAACCCCGCTCAGCTGTGACCGAGCCAGAAACGCTCCAGTCCCTCGAACTCCTGCAGGATGTACAGCTATGTGCACGAGCCATCGCCAAAATGAAAGTTGTGGGACCTACCTGCGCGCTGAAGAGCGGCAAAGTTGGAGGCGAAGATGTTGTCCGCTGCCTCTCCGACCAGAGCCTGGCCATCTCCAAATGCAAGATCCCGCTGCTGGACGAGCAGATGACCATGTTTCTCCAGGACATGAACAGCTGCTACAGCAAACTGAAAGAGCTGGTGCCCACGCTACCGACCAACAAGAAAGCCAGCAAGATGGAGATCCTGCAGCACGTTATTGATTACATCTGGGACTTGCAGGTAGAGCTGGAGAGCAAGAAGAATCAGAGCTCCGCTCCCCGCACTCCCCTCACGACGCTGAACGCGGAACTGGCCAGCATCTCCGTTGAGAATGGCTGTTCAGATGACCGAATCATGTGCCGTTAAAGCTTGATGCTCCGGTTTCACATCAACTGAAAGAAGCATCGCGAAGAAACAACAAGGTGCGCTGAGGTGATGATGGAGAACCGCCGTGACGCCTTGAACTGTGTTGGGAGAGTCTCATTCTCCTGTTGTAGAGGAAAACAAATTTCAGTAGAGAGTCACAAAACCCGTGGACATAAGAAGTGTGACGTGCTCTCTATCTCTCGAGATCTTCCCAAACATACCGATGTGTGTTAGCTGTGGAATCCATGGCGATTATTCACTTAGTTCATGCATTTCCCTCTCGGTCAAAGTTTCTTCAATGTTTTCTTAACTCTTTAGAAAAAATTCTATTTTGTTGTAAATGTTTTCTCAGATTACTGAGCGAAAGAATGTATTGTATATTACAATGACATATGATGTGAATGCTTTATTGTGTTTTTTACAATGTATATTGGGTTTTTTTTATTAAAACATGAAAATGAGACATATTTTGGACTTGTTTGGTCACTTTTTGTATGTGAGAATGAGTCAAAGTTGAACTTAAATATTTTTAAAAAGTTTATTTGGTCAATTTTTCTATTTAAAATGAGTTTGTTTCACAAGAGTAGAGGTCATTAGCCGGTTAATACATTAAACATTTTGCTGTAACATGTTTTCTTCATGTTACATTGTTGTTACTACACAATTTCTGCCATTATAGCTACAATTAAATTGAGTTCTCAATTTCAACTTGATTTACTGCGTCAGTAAATGAACTGAAAGTGAACTTCTCACTGCAGATTGTAGCTTTGATTTAGTGTATAAATGAAACACAAAATCAGCCATTAAACTTTCAATTTTAGTGGGTTCACTTTATCTCTTTGAAAATTCACAAACAAATTTAGTTGGTCTACAGCAACATTTCATCTTAAGATACAGGCCATATCTGATTTAACTACAATAACAAGGAATATAAACAAAAGGCAAA

Function

symbol description
id1 Predicted to enable protein dimerization activity. Acts upstream of or within negative regulation of neurogenesis and regulation of neuron differentiation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including brain; ectoderm; germ ring; mesoderm; and pleuroperitoneal region. Orthologous to human ID1 (inhibitor of DNA binding 1, HLH protein).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K04680 ID1; DNA-binding protein inhibitor ID1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04405407_04408449.mRNA True 1528 mRNA 0.42 3 4405407 4409395

Neighbor

gene id symbol gene type direction distance location
CI01000058_04360496_04365634 PFKFB2, F262 coding upstream 39289 4360496 ~ 4366118 (+)
CI01000058_04344622_04358133 NA coding upstream 47274 4343021 ~ 4358133 (+)
CI01000058_04303891_04308850 NA coding upstream 96410 4303804 ~ 4308997 (+)
CI01000058_04272001_04275349 NA coding upstream 129976 4271906 ~ 4275431 (+)
CI01000058_04263520_04265153 NA coding upstream 139779 4263124 ~ 4265628 (+)
CI01000058_04466648_04523385 ZMYND8 coding downstream 56801 4466196 ~ 4523483 (+)
CI01000058_04556260_04565696 FGD5A coding downstream 146762 4556157 ~ 4566008 (+)
CI01000058_04584028_04613429 FGD5A coding downstream 174633 4584028 ~ 4613747 (+)
CI01000058_04637318_04650366 PRKCDB, PRKCD, PRKCDA coding downstream 227823 4637218 ~ 4650506 (+)
CI01000058_04656762_04675421 SFMBT1 coding downstream 246921 4656316 ~ 4676097 (+)
G249970 NA non-coding upstream 64423 4340772 ~ 4340984 (+)
G249899 NA non-coding upstream 164512 4240237 ~ 4240895 (+)
G249886 NA non-coding upstream 186638 4217928 ~ 4218769 (+)
G249873 NA non-coding upstream 234315 4170590 ~ 4171092 (+)
G249869 NA non-coding upstream 250916 4154247 ~ 4154491 (+)
G249980 NA non-coding downstream 8530 4417925 ~ 4418264 (+)
G249979 NA non-coding downstream 10953 4420348 ~ 4420792 (+)
G250013 NA non-coding downstream 42132 4451527 ~ 4452571 (+)
G250035 NA non-coding downstream 132604 4541999 ~ 4542243 (+)
G250049 NA non-coding downstream 267518 4676913 ~ 4677151 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2607675 1794468 ~ 1800421 (+)
G247940 NA other upstream 2948960 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3117137 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3808236 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3949663 434913 ~ 455744 (+)
G250039 NA other downstream 285013 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 416981 4864571 ~ 4888216 (+)

Expression


Co-expression Network