CI01000058_04864571_04888198


Basic Information

Item Value
gene id CI01000058_04864571_04888198
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4864571 ~ 4888216 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04864571_04888198.mRNA
CTTCGTACCAGGTGAAGCAGGGAACCTGTGAGGTGGTGGCCATCCACCGGTGCTGTAATAAGAACAAGATTGAGGAACGTTCACAGACCGTCAAGTGCTCCTGTTTCCCAGGTCAGATGCAAGGCTACAGGACTGTATTATGGAGGCACAAGGAATCTGATGTAACTGAGACACTAAAAGCAAGAAAAATCCTTCCAAGTATGTGGGCTTTGGCCAAACTCTATCCAGTTAAATGCTGGACAGAGAGATTTGGTGAGGAAAAGCTGAAAAGAGGTTCAGACAAAGCTTCCATCGTGCTGCAGAAGTGGTGGTGCCAAATGCACCCATGTTTGGACGGCGAGGAGTGTAAAGTTCTTCCAGACCTGACTGGCTGGTCTTGCAGCACCGGAAACAAAGTCAAAACCACCAAGGAGCCAATGGGCAGTGGTCACACGATAGCAAGAACATGGCTGCCTTACCAAGTGGCGAAATCTCCTCACCAACCCCTAATGGAAAAGGAGACCCTTTTGTTTAAGACACTGACATTACGGAGGATTCTGTACAGGCAAAAGATGGACAAACATATTGTAGACTATAGATGGCTGCCTTGTCTTGACAGAAGATATAAGGATGGACAAGGATCTCTATATAAACCTGAGGTTCGATTGAAGATGCTGGACACACAGCTCTGTACGCTAGGCTCGCCCTGGGCCTGCCCAGACGTCTTCCAGGCTTCAAAGCCCCTTCAGACTCCAGCCGTCTGCTTTGTGAGCTGTGATGAATGTATCAGAACCACTGTGATTCCAGTGTTGAGCCTTGGGAGACGGGGTCGAGTGCCATCTCGAATTCTCATTACTGAAGCCCAGGATACCGCCAGCCCTCTCCTGGGATGGGCTTGGTGTATTTTTAGACTGGGAGGAGACGTGCTGTGCATGACCCACATCTTCAATTGGCGAATCGATGTTCTGCTCTGCCAGCTGAAATTAATTACTAGATACGACAACCAGCTACAATGCACTCAGAAAGTACCATTGCTGTTCCGGGCATTTGCAAAGAGACATAAAACTTGGATTTTGAGGACACATGGGAAGGGTTTTTCAAAAATAAATGACATTGCAGTTCTGCCTGAAGACATTGTTTTTTGACGTCCTGCACTGTATGTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04864571_04888198.mRNA False 1142 mRNA 0.48 9 4864571 4888216

Neighbor

gene id symbol gene type direction distance location
CI01000058_04806751_04821030 NA coding upstream 42876 4806751 ~ 4821695 (+)
CI01000058_04792565_04803181 TMF1 coding upstream 61167 4792565 ~ 4803404 (+)
CI01000058_04782847_04791049 UBA3 coding upstream 73016 4782847 ~ 4791555 (+)
CI01000058_04777182_04780095 NA coding upstream 84195 4776542 ~ 4780376 (+)
CI01000058_04769469_04774262 TWF2B, TWF2 coding upstream 90086 4769469 ~ 4774485 (+)
CI01000058_04923557_04926609 NA coding downstream 35074 4923290 ~ 4927654 (+)
CI01000058_05091135_05091372 NA coding downstream 202919 5091135 ~ 5092015 (+)
G250075 NA non-coding upstream 126126 4727809 ~ 4738445 (+)
CI01000058_04678629_04687645 TMEM110 non-coding upstream 175051 4678102 ~ 4689520 (+)
G250049 NA non-coding upstream 187420 4676913 ~ 4677151 (+)
G250035 NA non-coding upstream 322328 4541999 ~ 4542243 (+)
G250013 NA non-coding upstream 412000 4451527 ~ 4452571 (+)
G250120 NA non-coding downstream 16724 4904940 ~ 4905140 (+)
G250124 NA non-coding downstream 30156 4918372 ~ 4918573 (+)
G250187 NA non-coding downstream 196424 5084640 ~ 5137852 (+)
G250219 NA non-coding downstream 292685 5180901 ~ 5181105 (+)
G250039 NA other upstream 167410 4694408 ~ 4697161 (+)
CI01000058_01794468_01800421 KISS1 other upstream 3066839 1794468 ~ 1800421 (+)
G247940 NA other upstream 3408124 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3576301 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 4267400 592331 ~ 597171 (+)
G250098 NA non-coding downstream 168 4884005 ~ 4884279 (+)
G250095 NA non-coding downstream 625 4884462 ~ 4885100 (+)

Expression


Co-expression Network