CI01000058_04923557_04926609


Basic Information

Item Value
gene id CI01000058_04923557_04926609
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4923290 ~ 4927654 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04923557_04926609.mRNA
GTATATATACAGAAATATATACAGTTACTTTCAATACAAAGCTCCCACAAAATACACTGAGCATGCCGACAAATAAAAAGATATCTGGCCCAAGTAGGTGTAGACAGTGAGGTGACCTTTGACCCGAGGGAATTCCAAAACGAACAACGTGTGGACACTAGCGGTGAGCGGTAAACTCAGAAGTGGAGGAAAAATAGCAGGGCTTCACAAGCTCCCAGTCTATTACCAAAGCCAGCGTGGACGGCAGAACGACAAACTGATGGAGGGATGGAAAAATCTCCTATTGATTTCCACCTCATTTTCACAGACCAATGCTTATCCATCATGATCCTTCATACAGTCATTCACAGCTTATATCAGGATTGTCCAGTTTACCTAGGAAGAGAGAATCCACATTCACTGCTTGTGAAGGAGCTCTTTGTTAGGTCCGGGGATGAATCTGAAAACAGACAAAAAGGAAGAGAAAATACAGACGCACGCTTAGAACAAAGGGACCCCTATTTAGTCTGTCTGAGTTACGCTCCACGTGCTCCCAACATTCTGGGCAAGGCACGGCTGAGGAGGAGGAGCTGTCCATCAGAACGAATCCCTTCTGGAAAGGGACCAGTTCATGCCAATCAAAAGAGGTTAGCCAGCCAATGGCATCACACCATACACAGCACCCTGGCTAACATCAGTAATATCCTGCACTTCTGTGGCATTCCACCAATGAGACACAAGGAAAACAGCTGCTTCTTTGACAAAGAATGCAAAAATCTCTTTGTTTAAAATAATCCAATTTGTTGGACTTAATGCTTATTTTATATACATGTAAACACTGACAGCTCTGTGCCGGAATTCATTTCTGTAGTCTTTTGTGCTTTTTGTGCCAAGCATCTAGTTTGTTCTAAGCTGAATGTTCCTTGTCTTTCCTCCCCAAAACAAAAGCTTTTGCATGCTGCGCAACTTCCATCCCCCACATACTACGCAAGAAGCAGTATAGTGACCCTGATGCAATTTGTCTTCGGCTGTCTGTGAGTATGTATGGCTCTGTCTCTCCCAATGCGGTTTGTTATAGTGGACTTTATGCAAATGCTGCCATATTTCCTCCATTTTTGCTCAGGTGTCCTCTACTGTCTGCTACTGCTTCCATTGATTGGCTGGATTCGGGGTTCAAAGCACATCCCAAAGACATTTGTTGTACACCTTTTGCATTTTAATTCTCAAATGATATTTCAATTTTGTTGAGCATGCTCCATTTACTAAAATGTAATCTTGTTTAGATTATGCAGCTGTTGAATATGACTTTTAAATGAGGATAGCATACAGCAAGACTCCAGACAGCATGAATGTGTTAGAATTAATTTAATGTGACATTGACAGCTGAAAGAGATACAGATACAGTCAAGGCTCTGGGTTCAACAGGACTCCTGGGATAAGCAGACTTAATCATCATGTGATTTAATCTTAAACCATCACTTGGAAGATTACTTTTGCTCTGAAAAGCCACACAGATGGGATTCTTTGAACAGTACAGGTATCTTGTAAAAAGCCTTCTGTTAAGAACGTGTCTCAGAGACATACTTGCTGACCAAATCTGTCTCAGAGAGGAAACAGCAAGCCATTACATTTTCTCAGAATGTTCTGAGAACTGAACATGCTGTTTCCTTGTAAACATTTAATTGTATGTGAAGCATGCAGAATAGAGAATGTCGATAACAGAATTTATCATTAAGCACTAAAAGCTCATCCTTTTTGGGAAAAGAAAAAGAAAAAAAGTTTACAAAACTAATTGGTTGAATGCTCACATACCCTTTATTTCAACGAGATCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04923557_04926609.mRNA True 1813 mRNA 0.41 4 4923290 4927654

Neighbor

gene id symbol gene type direction distance location
CI01000058_04864571_04888198 NA coding upstream 35074 4864571 ~ 4888216 (+)
CI01000058_04806751_04821030 NA coding upstream 101595 4806751 ~ 4821695 (+)
CI01000058_04792565_04803181 TMF1 coding upstream 119886 4792565 ~ 4803404 (+)
CI01000058_04782847_04791049 UBA3 coding upstream 131735 4782847 ~ 4791555 (+)
CI01000058_04777182_04780095 NA coding upstream 142914 4776542 ~ 4780376 (+)
CI01000058_05091135_05091372 NA coding downstream 163481 5091135 ~ 5092015 (+)
G250124 NA non-coding upstream 4717 4918372 ~ 4918573 (+)
G250120 NA non-coding upstream 18150 4904940 ~ 4905140 (+)
G250095 NA non-coding upstream 38190 4884462 ~ 4885100 (+)
G250098 NA non-coding upstream 39011 4884005 ~ 4884279 (+)
G250075 NA non-coding upstream 184845 4727809 ~ 4738445 (+)
G250187 NA non-coding downstream 156986 5084640 ~ 5137852 (+)
G250219 NA non-coding downstream 253247 5180901 ~ 5181105 (+)
G250039 NA other upstream 226129 4694408 ~ 4697161 (+)
CI01000058_01794468_01800421 KISS1 other upstream 3125558 1794468 ~ 1800421 (+)
G247940 NA other upstream 3466843 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3635020 1278592 ~ 1289874 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003377 BX571952.1 non-coding NC_007122.7 CM002895.2 17440591 ~ 17513632 (+)