G247592


Basic Information

Item Value
gene id G247592
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 646443 ~ 654949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281026
TTTGTTTGTGCTTCTTTATTTTTCTGGTCCCTCACATAATATTTATTGAATAAACACTGTATCTGCAGTAAAGTTGTAAACGCAGAGTGTTTGACAAGAACATTTTTGTAAAGGTTAATGCTCTGTGTTTTGAATGTGCTCAAGATTCTAAAAGTGCTTTTATAGTATTATGTATTGCTAAAGCAAATGGCAATAAATTATCAGAGGAAATATAGACACTGACAGAAAAACAAGGGCTGTACAGGGGCTTTCATTAGTGCTGATAATACACATAGATTTTACATACAGGATATATGTTTTCAGTTAGATGATGAAATGCATATATTAAGGTTTTCGAGTGCCATCAACACTTGAAAAACAAAACAGAGTAAAACAAAGCACCGATCGACACCCCCAAACCCCCACCCCCCTCACAAAAAAATAGCTTTTAGAAATGATCACATTTAGGACTTATTCACTGTGCTTCAATAAGGTATAGCTCTGTTCTTGATGAAAAGATCTCAATCACATTTAATATGAAGGTAGTTTATATCATCAGACATGCATTATGCACTTTACTCTGTTATACCAGGTTACATCACTGGCAAGTCGGTTAACTATGAATGTCCTTCGTCCCGAATTGTTTTCCGATTTGTAAAAGGCTTTTGTGCTGCTATGTAATTTGGAAGAGCGGATAGTGTCGCCTCTTTAGCTGTGTCCAGGCCTTTTCCTTCTTTGGATGAGAATCCCGTACAATGTATAACCAGTTCAAGACATTTATGTCTGCATTTCGACACTGTACCATTAAAGCCACAGCCAGACATAAAAATGGCCATATTGATGATTTGGTCTGTCTTGAATTCAATAAAAAGTCCACAGAAAGCAGTAGAGAGAGCATGTGTGAGAATAGTGGGACGTCCTCCCTGCTTCATGTGTCAGCTTATAGTCCTGTACACAAAGTCACTACAGGAGCCAGATCATACAGGGGAAGGGAGACGATTGAAGGTTTGGATGCACACTAAAGATTACCTGATTAAGACTGAGAGAAATCGATAGTTAAAGGGAGAGTTCACCCAAAAATGAAAGTTCTGTCATCTTTTACTCACCCTTGTGTCGTTCCAAACATGCATGGCTTTCTTCCATTGAACACGAAAAAGGAAATTTAAGAATCATAAACGTGCAAAAGAACCATAAAAGCTTCATAAATGTGGTCCATATGACTAGTGCACTGAATTCCAAGTCTTATAAAGCCATCCAATAGATTTGTATGAAAAAAAAATAGCTCAAATTTGCATTGTTTTTTACTGAAAAGTTTTACATTCACCCTGGGTGAATATTTGGCATGTTAATGCAATATGTAATGATATCTAATTCATAAACAAATTGTTTGCTTGAATCTTTTTGAAGAATTAGTTGATCCACAAAATCAGTCCGAATGTTTCATTCATGAGTTCGACTTATGGTTATGATTCTAAAATTCACACAGTTAATATATGATCTCATATGACTTCCCTTATAAGACTTGGAATACACCTCAGAAGTCAAATTGACAATTTCAATGAGATTTTTTGTTTGCATGGACAAGTTTGGTCAGTACAATTCTTTTAAAAAAATTCTCCTTTTGTGTTCCCTGGGTGAAATAAGTCATATGGGTCTTAAAACGGGATGATAAGTAAATCATGACAGAAGTTTTATTTTTTGGGCGTACTGTTCCTTTAAGGTGAGGGACTTATGTACATTATCAAGGAGTCAGTTACGCGTTGAGTGGTGCGACCATGGATCCAGCTTCCTACATCACACTGCACTTCGCCTTCAGCTTGTCTGCACGTCTCTGCTTGCTGGAGCGCATGTTCAGACTCATATCCCGCTTCTTATCCAGGTTCAGGAGCTCCTGAAAAAGCTCCTTCACGTTGGAGTTGGTCTTGGCTGATGTTTCCATGAATGCACATTTCCAGATGTTTGCCTGAGCTTCGCCCTCCTTGGTCTCAACCTCGCGCTGGGTCTCGTCGCTCTTGTTGCCCACAAGCATGATGGGGATGTTCTCCACGTTACCTTTGATGGCCAGCACTTGCTGGTAGATGGGCTTCAGCTCCTCCAGCGACTGTCTGCTGGTGATGGAGTAGACCAGGATGAAGGCATGGCCCTTGGAGATGGACAGACGCTGCATAGCAGGGAACTGGTGGCTGCCAGTGGTGTCGGTGATCTCCAGTGTGCATACGCTCTTGTCGCAGCTGATGACCTGTCGGTATGTGTCCTCCACCGTCGGGATGTAGGTGTCCCTGAAGGTGCCCTTAACGAAGCGCAGAACCAGGGAGCTCTTGCCCACGCCCCCTGCTCCAAAGACCACCACCCGGTAATCATTACTCTGCTCTGGCATGCTGCTCAGGTTTATCGGGGTATGTGGCGGTTAAGAAGATTATTCCCTGAGATCTGGCGACTGTGTTGCAACGTCCCAAATCTTGTTAGTCATAAATTACAGGAAGCATTAGGAGATCAGATACACGACAAATGTCTTACACTCTCTGCCGTACCAGTCCCGTTTCATTTTCTCGTGTTATTTGCATGGCGTAAATCGAGTGATGTCGCTGAAAATGCTGTTATTGCTCTTCGGGCGGGCGGGCGCGCGCGCTCCAGCTGTCCTACCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281026 True 2626 TUCP 0.42 2 646443 654949

Neighbor

gene id symbol gene type direction distance location
CI01000058_00599524_00634109 APC2 coding downstream 12334 599179 ~ 634109 (-)
CI01000058_00570327_00573074 NA coding downstream 73369 570273 ~ 573074 (-)
CI01000058_00482663_00504956 RPF1, SPATA1 coding downstream 141237 481748 ~ 505206 (-)
CI01000058_00441219_00462553 NA coding downstream 183724 441211 ~ 462719 (-)
CI01000058_00424190_00424456 NA coding downstream 221480 424142 ~ 424963 (-)
CI01000058_00665144_00668842 NA coding upstream 10087 665036 ~ 668842 (-)
CI01000058_00673067_00690079 NA coding upstream 17269 672218 ~ 690095 (-)
CI01000058_00694430_00713270 ADGRL4 coding upstream 39390 694339 ~ 713270 (-)
CI01000058_00958655_00993242 NA coding upstream 303672 958621 ~ 1025837 (-)
CI01000058_01143391_01218374 TTLL7 coding upstream 488395 1143344 ~ 1218374 (-)
G247524 NA non-coding downstream 68005 578220 ~ 578438 (-)
G247520 NA non-coding downstream 80828 565032 ~ 565615 (-)
G247522 NA non-coding downstream 82280 563667 ~ 564163 (-)
G247515 NA non-coding downstream 85447 560563 ~ 560996 (-)
G247511 NA non-coding downstream 92583 552741 ~ 553860 (-)
G247601 NA non-coding upstream 16147 671096 ~ 671356 (-)
G247618 NA non-coding upstream 72489 727438 ~ 727802 (-)
G247624 NA non-coding upstream 77130 732079 ~ 732345 (-)
G247725 NA non-coding upstream 98945 753894 ~ 754675 (-)
G247726 NA non-coding upstream 100556 755505 ~ 755727 (-)
CI01000058_02859435_02860658 FAM72A other upstream 2203534 2858483 ~ 2861491 (-)
G250230 NA other upstream 3033694 3688643 ~ 3696711 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003225 diras1a coding NC_007122.7 CM002895.2 7324704 ~ 7341807 (+)