G247663


Basic Information

Item Value
gene id G247663
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 785025 ~ 785240 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281119
GAAACTCTGCTGACTCACATACTCAACTGTCTTGGGAGGAAGTTTAACTCTGACTTCGGCTCAGTTTAGTTCAGAGGAGTCAAGAATTTCATTAATTAGAACTTTGTAAGAGAGAACAGAAAAGAGAGAGAGAATCACATTCATAGTTCTAAAAAGACAAATACCCACAAATAAATGCAAACAGGCCACAGCTTCATTTCAACAAACATATGGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281119 True 216 lncRNA 0.38 1 785025 785240

Neighbor

gene id symbol gene type direction distance location
CI01000058_00728698_00738214 NA coding upstream 46087 728520 ~ 738938 (+)
CI01000058_00652594_00653181 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding upstream 130122 652335 ~ 654903 (+)
CI01000058_00592498_00596709 NA coding upstream 188212 592331 ~ 597171 (+)
CI01000058_00548398_00567030 NWD1 coding upstream 217853 547827 ~ 567172 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding upstream 240998 529185 ~ 544027 (+)
CI01000058_00847992_00862210 NA coding downstream 62057 847297 ~ 862430 (+)
CI01000058_00870909_00930600 ADGRL2A, ADGRL2 coding downstream 85669 870909 ~ 930600 (+)
CI01000058_01239590_01240099 NA coding downstream 454262 1239502 ~ 1240300 (+)
CI01000058_01248234_01262911 PRKACBA, PRKACB coding downstream 462994 1248234 ~ 1263318 (+)
CI01000058_01266712_01271962 SAMD13 coding downstream 480513 1265753 ~ 1274437 (+)
G247653 NA non-coding upstream 21210 763595 ~ 763815 (+)
G247641 NA non-coding upstream 30339 740848 ~ 754686 (+)
G247617 NA non-coding upstream 57197 727439 ~ 727828 (+)
G247578 NA non-coding upstream 68248 716510 ~ 716777 (+)
G247563 NA non-coding upstream 101583 683226 ~ 683442 (+)
G247667 NA non-coding downstream 5039 790279 ~ 790496 (+)
G247672 NA non-coding downstream 8848 794088 ~ 794313 (+)
G247683 NA non-coding downstream 21645 806885 ~ 807312 (+)
G247639 NA non-coding downstream 145764 931004 ~ 932179 (+)
G247696 NA non-coding downstream 150975 936215 ~ 936445 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 329281 434913 ~ 455744 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 443369 1278592 ~ 1289874 (+)
G247940 NA other downstream 667757 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1010473 1794468 ~ 1800421 (+)
G250039 NA other downstream 3909168 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 4041136 4864571 ~ 4888216 (+)

Expression


Co-expression Network