G248027


Basic Information

Item Value
gene id G248027
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1400988 ~ 1401268 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281516
GTAAGGCTTGGATGCAGCTGCTCGGCCATGGAAACCCATTCGATGAAGCTCTCTACGCACTGTTCTTGAGCTAATCTGAAGGCCACACGAAGTTTGGAGGTCTGTAGCTATTGACTCTGCAGAAAGTTGGCGACTTCTGCGCACTGTGCGCTTCAGCATGCGCTGACCTCGCTCTGTGATTTTAGGTGGCCTACCACTTCGTGGCTAAGTTGCTGTTGTTCCCAATTGCTTCCACTTTGTTATGATACCACTAACAGTTGACTGGAATATTTAGTAGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281516 True 281 lncRNA 0.49 1 1400988 1401268

Neighbor

gene id symbol gene type direction distance location
CI01000058_01391493_01394283 NA coding upstream 6569 1391493 ~ 1394419 (+)
CI01000058_01384467_01388274 NA coding upstream 12061 1384204 ~ 1388927 (+)
CI01000058_01364846_01374544 NA coding upstream 26404 1364846 ~ 1374584 (+)
CI01000058_01348684_01352173 NA coding upstream 48400 1348684 ~ 1352588 (+)
CI01000058_01298298_01311989 BMP7A coding upstream 87942 1298076 ~ 1313046 (+)
CI01000058_01431719_01434294 CHIA.2 coding downstream 30291 1431559 ~ 1434513 (+)
CI01000058_01496481_01498802 NA coding downstream 93602 1494870 ~ 1499810 (+)
CI01000058_01580247_01591754 NA coding downstream 178395 1579663 ~ 1592253 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 224083 1625351 ~ 1665794 (+)
CI01000058_01740599_01784355 PLEKHA6 coding downstream 339331 1740599 ~ 1784676 (+)
G247960 NA non-coding upstream 70128 1303301 ~ 1330860 (+)
CI01000058_01280337_01289153 DNASE2B non-coding upstream 110501 1278592 ~ 1289874 (+)
CI01000058_01266712_01271962 SAMD13 non-coding upstream 126551 1265753 ~ 1274437 (+)
G247917 NA non-coding upstream 152084 1221593 ~ 1248904 (+)
G247995 NA non-coding upstream 169142 1230210 ~ 1231846 (+)
G248031 NA non-coding downstream 2116 1403384 ~ 1403656 (+)
G248035 NA non-coding downstream 5388 1406656 ~ 1407006 (+)
G248036 NA non-coding downstream 7834 1409102 ~ 1409884 (+)
G247934 NA non-coding downstream 61015 1462283 ~ 1465887 (+)
G248052 NA non-coding downstream 66369 1467637 ~ 1503560 (+)
CI01000058_00592498_00596709 NA other upstream 803817 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 945244 434913 ~ 455744 (+)
G247940 NA other downstream 51729 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 394445 1794468 ~ 1800421 (+)
G250039 NA other downstream 3293140 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3425108 4864571 ~ 4888216 (+)

Expression


Co-expression Network