G248035


Basic Information

Item Value
gene id G248035
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1406656 ~ 1407006 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281524
AGAACACAACAGTTTATATAGGATAGGAGCATGGCAAAGCATTCTACAATATGATTGGTTCTTCATATGTCAAACCCTTCTGTTACCAGGTAAAGCAAGATCTGCCCAAATCATGTGTTTATTAGTTTGTTGGTTACTCAATATCATGGGGCTATTATATTTAGATAGTTGTCTAGCTGTCCCTAAATTTCATTTCCACTTTTCTTATATTTGGACATGATTCAGACACACACTGACTTAGGCCCAAGGTGGACTTTTAGGTTTAAAAAGCATATAAATGTTATTCCTGCAAGGAAAAAGAATGTTAGTTATGATTAATTAAAAAAAATTCTATCACAATCCTTACTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281524 True 351 lncRNA 0.33 1 1406656 1407006

Neighbor

gene id symbol gene type direction distance location
CI01000058_01391493_01394283 NA coding upstream 12237 1391493 ~ 1394419 (+)
CI01000058_01384467_01388274 NA coding upstream 17729 1384204 ~ 1388927 (+)
CI01000058_01364846_01374544 NA coding upstream 32072 1364846 ~ 1374584 (+)
CI01000058_01348684_01352173 NA coding upstream 54068 1348684 ~ 1352588 (+)
CI01000058_01298298_01311989 BMP7A coding upstream 93610 1298076 ~ 1313046 (+)
CI01000058_01431719_01434294 CHIA.2 coding downstream 24553 1431559 ~ 1434513 (+)
CI01000058_01496481_01498802 NA coding downstream 87864 1494870 ~ 1499810 (+)
CI01000058_01580247_01591754 NA coding downstream 172657 1579663 ~ 1592253 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 218345 1625351 ~ 1665794 (+)
CI01000058_01740599_01784355 PLEKHA6 coding downstream 333593 1740599 ~ 1784676 (+)
G248031 NA non-coding upstream 3000 1403384 ~ 1403656 (+)
G248027 NA non-coding upstream 5388 1400988 ~ 1401268 (+)
G247960 NA non-coding upstream 75796 1303301 ~ 1330860 (+)
CI01000058_01280337_01289153 DNASE2B non-coding upstream 116169 1278592 ~ 1289874 (+)
CI01000058_01266712_01271962 SAMD13 non-coding upstream 132219 1265753 ~ 1274437 (+)
G248036 NA non-coding downstream 2096 1409102 ~ 1409884 (+)
G247934 NA non-coding downstream 55277 1462283 ~ 1465887 (+)
G248052 NA non-coding downstream 60631 1467637 ~ 1503560 (+)
G247993 NA non-coding downstream 85173 1492179 ~ 1550850 (+)
G248103 NA non-coding downstream 209570 1616576 ~ 1617014 (+)
CI01000058_00592498_00596709 NA other upstream 809485 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 950912 434913 ~ 455744 (+)
G247940 NA other downstream 45991 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 388707 1794468 ~ 1800421 (+)
G250039 NA other downstream 3287402 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3419370 4864571 ~ 4888216 (+)

Expression


Co-expression Network