G248943


Basic Information

Item Value
gene id G248943
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1605938 ~ 1609817 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU282533
GTATTAAATGTATTCATTGACTGATATTGTTTCTGGCCTGCTCTGTACCAGTGTTCCTCATAATTTTCATGCTACAGCAGAGATTCTCAGTTAATATCATTATGGAGAACATGAAGTAGCCCATGCATCTCACTGCATGACTCACTCCTGTTTCCATTTTAAAGCTCTTCCTGTCTGGTGCACTCTGAGTATTTTATCATGCATCAGTAGGTAAATATCCAACAAAATCATTGAATGTGAGACATTGTCCATGTTGTATTTGCCACACCTTTACAAGTGCTGTCTCAGACGTCCTTTTATATTTTGTTTGATCTATAGTTTCGCTCACCTCTGTCTTTCCAACAATGACCTCTGTGACATATGATGGTGTTTTTGATGTACAACATCAAAGCGTTTCCAGTGCATTGTTTGCATCCTTATTCTTCTTATTTCAAAGCATTATATGCACTGTAGGAACTATCTATAACTGTAACAGTCCTCCAGTGGCTTTTTACTTCTCTCTGTGACTTTTAGCAGGGCGCACATGGTACCCTACACCCGCAGGGAGCCTGGCTCTGTGAAGCCAGCAGCCCTGCACCTGCACAGGCTTCTGAAGCAATGGGTCATTCGTATGCATCAGGGTCAGAGTTTTCCCAAAGGAACTGCTAATAGATTAAGCACATGAATTAAGCATGGGAAATACAGAAAATATTGTCCAGGACAATTAGTGAGGACAGTAATGAGACTAATGATGGAGTGTGTGTGTGTGTATATATATATATATATATATATATATTTGTATTATTACATTGCATTGTCTTTTGCCCTGTAGAAGTAATAAATGTAGTTGTTAGGATTGCGGCCCTTCAGATGGAACATATGTTGACATCGGGATTGATGCAGTTGACCTGTTTTTTTAAATTAGTGAAATGTGATTTATTTTTTTCCAAATTAGTGGTTTGAATTATTTTAAATAAAGTAGTTCGACCAATGCGGCAAAGTCTCCATTCATTACAAATATCGAAGATGGACAATGAACCATAGCCACATTCTTAAATGGTAAATCCTTAAAGAGTCAAAAGTACATGATGCAATCAAACCCTTTATCAACATTAAATAGAGGCTGAGTTAAGTATAGTTCAGATGAACAGATTTGTTGAAAAGAAAATTTGCGAAGTATAATGAATACAAAAATAAAGAAGCCTTCCAATGATTGTCATTGTGAATCATTTAAAATCTTTTCAGTATAGAGTTGGATGCTGCTTTCTTTAACAAAACACAGACATCAGAGAGGCTTTCTAATCGCATGTGTTGACACAGGTTTTACATTGTACATAATAAATATGATGTTGAAAAGGGCTACAGTATACCTTTCATGTGGCTTCTTGTTTGATTTACAGTATTGTTTATGGCTGAAAGGAGGAAATCTTTTAACAGAAGACTTCTTCTCTTTAGTGCAGAATTGAACTCTTTGGGGATTTGTTTTGTTAAAAGTCATTGAATGACAGATGTTTGAGGTCCCGAAGACAAAGAATGCTGGAGATTGGATGATGAACATTAGCTAAAAAAAAGCTAACCATTAACTAGACCGTGAGAGCAGTAGTAGGTATTTGTGAACCTTTGTTGAAGAAGCACTTCCAATGAAGTAAAGCTGTACTGTACTTGATTGGCTGGTAATTAATACAATAGGTTAGTTAAGTTGACAATAAAGAACCTGTGAAAAATGAACTGTTAATGGTTGTCAGGTGCCTCTACATGTGTTTCTGTTTGATATGTCATTTTCTTCCGGCCAGTATGTTCTTAAATATTTTTAAAAAGAATATAGAAATGCATTTAAGTATTTTGCTGTCATCACCAAAACCTCAGATCACAACTTTTAATGTAATAATTTCAGCAGGATTGCTGTCGTTATGAGTGAAAAATAAGTCCATATTTGAATTGAATTGTGTATTTGATTAAAACCTATAATGCCCCTTTTACAAGATATAATATAAGTCTCTGGTGTCCTCAGAATGTGTCTGTGAAGTTTCAGCTCAAAATACTCCACAGATCATTTGTCATAGCTTGTCAAATTTGCCCCTATTTGGGTGTGAGCAAAAACACGCTGTTTTTGTGTGTGTCCCTTTAAATGCAAATGAGCTGCTGCTCCCGGCCCACTTTCCAAAAGAGGGCGGAGCTTTAACAGCTTCGGTTGCTCAACAACAACAAAGCTGGAGAATCTCACGCAGCCAAAATGAGTTAGTAACAGTGTTCAGCCCTTACATTGTTCAAACCGGAGTCGGACACTGATGGAGAGACTCAGGAAGAAGTTACAACTTTTAGAATTCAACTGGACATTTCGGAAAGGTTAGTGGATACATTTATGTAGTTGATTCAACTCATCGACTAGCATGTGCCATCATGTTAATCTTCAATTCAGCGTTGAATTGACCCTGGTTTGTGAAGCAGTCCGGCGTAAAATGACAGCATGGCAACAACACTCTCCTACAACAACTCTTCCTCTTCTCTAAAGCAGCTCAACATGGCCTCGCCCCATTTGTTGTGTGTTCTCGGGGGCAGGGTTTATGTAAATTTTAGTGTTAGTGACATCACTAACCTGGGAAGAAGCTCGTTGTAGTCCCTACCAGCTGTTTGTTGTAGTTCTTAAACAGCGAATTCTTTAAAAGAAAATATCTCCCTTTGCATTGAACTTTGAGCGTCATAACTTTGCAGATGTTGTTTATGCTCAAACAGCAACATTACACGCTAACTAAATTTAAAAGTGAAATCATAATCAACCACTCCTTTAAAAAAACGTTCCATGCCAAATTCAAAGCCATATGGCCAAATCATTCTTTACCAGATTACACTCAGTTAAGTTAGCCTAGAAATCAATAACCCTCTGATCAAATTAGCAATGGAGTCATCTGATATGACACATTTTCACATTTCAGCTTGTTTAAGAGTGGTTGGGTGAAGGGGAGGTCTTCATTAGATCTGTATATCCCTTGGGATCACAGACAGCCAGCAAGCAAGCCCTGGAATTTCCCCATCAAAACCTGCCCAGGTGGAAACACCTGTCGCCGTAAACAATGAAGAAAACATGACACATGCCTTGTCTTGTTCTCTAGTGTGAATGGAAGTATGGACAATAACAAGCATCTTTATAAATGGTGATGGGATCGGAGGTCAAGGTGTGAGGTTTTGGTATTACTTCCAGGTGCACTTGATGTTGTTAAGAATGGAAAACCACATTTAGCCTACTATAGAACTGCCTGGCAGCTTCAAATTGGCCTCTGTGTTCTTATTAGCGTGGTTTCTGATGTGTCAAGACTGATGTTAAGTCACTTGGGACATATAGCTCAGGGATATTACAGATGATTCTTCATTTATGTCAACGGTCTTGTACTGCCACTCTGCAATTACTGTGAGATTGAGCTTTCTGTATCTGTGTCATGCAGTCAGTCACAAGGATGATGTGAAAAAATGAAGACTCATTCCTGTCAGGAAACCTGAGCCTTGGGGCTTGAGGGGAGGGAGGTTTCGAGAGAGAGAAGAGAGGACTGTTTGTGTCCTCATATGTCGTTTGGGGTGGTTGGACGCACAGTGGATGAGGTGTCATTCTGTGAAACCATTGCTTTTACAGTTTGATAAGGGGATTTCTGGTGGATTTTTAAACTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282533 True 3641 lncRNA 0.39 3 1605938 1609817

Neighbor

gene id symbol gene type direction distance location
CI01000058_01528111_01564969 NFASC, NFASCA coding downstream 40969 1527499 ~ 1564969 (-)
CI01000058_01510773_01517931 NA coding downstream 86756 1510350 ~ 1519182 (-)
CI01000058_01462558_01465691 CHIA.1 coding downstream 139809 1462523 ~ 1466129 (-)
CI01000058_01453383_01456154 CHIA.2 coding downstream 149654 1453084 ~ 1456284 (-)
CI01000058_01418324_01423047 NA coding downstream 182411 1417497 ~ 1423527 (-)
CI01000058_01680894_01693752 NA coding upstream 70977 1680794 ~ 1694205 (-)
CI01000058_01694694_01723697 NA coding upstream 84862 1694679 ~ 1724208 (-)
CI01000058_01807681_01819809 NA coding upstream 197854 1807671 ~ 1819809 (-)
CI01000058_02049299_02051461 LRRN2 coding upstream 439472 2049289 ~ 2051809 (-)
CI01000058_02100559_02106600 NA coding upstream 490201 2100018 ~ 2106652 (-)
G248916 NA non-coding downstream 107721 1446661 ~ 1498217 (-)
G248914 NA non-coding downstream 171009 1431615 ~ 1434929 (-)
G248901 NA non-coding downstream 204196 1401538 ~ 1401742 (-)
G248899 NA non-coding downstream 205073 1400653 ~ 1400865 (-)
G248895 NA non-coding downstream 224589 1381150 ~ 1381349 (-)
G248955 NA non-coding upstream 7634 1617451 ~ 1617654 (-)
G248958 NA non-coding upstream 11196 1621013 ~ 1622953 (-)
G249014 NA non-coding upstream 146144 1755961 ~ 1768102 (-)
G249024 NA non-coding upstream 180917 1790734 ~ 1791212 (-)
G249077 NA non-coding upstream 214197 1824014 ~ 1824332 (-)
G247592 NA other downstream 950989 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 1248666 2858483 ~ 2861491 (-)
G250230 NA other upstream 2078826 3688643 ~ 3696711 (-)

Expression


Co-expression Network