G248958



Basic Information


Item Value
gene id G248958
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1621013 ~ 1622953 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU282548
GTGACCCGTTGTTTCCTTCAGAATGTGACAACAGTGGCAGGGGGTCTGTTTCTCCGCCCACAAACACAACTGTAGAAAACTCTCACACCCTACGCCAGAAGAGTGGCACCAGAACAAGGACTAAAGAGGAAGCAGAAAGGCATCTGTTTGACAGACATTCCTGGACTCTTCCATCGCTGAACATTGACCCCATTTTGCATCCCAAAAACGCAAAAACCAGCATGCCTCTGGTCATCTGAGGACATTCATCTGAATAAATAAGGTCTTAGGTGCGCGGGTGGCTTCAGAGATAGAACACGTGATATTTTGCACACTGATAGACCTGAAACAGGTAAATGTCTGAGACTAATTCCTGATGGTCATGTTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU282548 True 368 lncRNA 0.46 2 1621013 1622953

Neighbor


gene id symbol gene type direction distance location
CI01000058_01528111_01564969 NFASC, NFASCA coding downstream 56044 1527499 ~ 1564969 (-)
CI01000058_01510773_01517931 NA coding downstream 101831 1510350 ~ 1519182 (-)
CI01000058_01462558_01465691 CHIA.1 coding downstream 154884 1462523 ~ 1466129 (-)
CI01000058_01453383_01456154 CHIA.2 coding downstream 164729 1453084 ~ 1456284 (-)
CI01000058_01418324_01423047 NA coding downstream 197486 1417497 ~ 1423527 (-)
CI01000058_01680894_01693752 NA coding upstream 57841 1680794 ~ 1694205 (-)
CI01000058_01694694_01723697 NA coding upstream 71726 1694679 ~ 1724208 (-)
CI01000058_01807681_01819809 NA coding upstream 184718 1807671 ~ 1819809 (-)
CI01000058_02049299_02051461 LRRN2 coding upstream 426336 2049289 ~ 2051809 (-)
CI01000058_02100559_02106600 NA coding upstream 477065 2100018 ~ 2106652 (-)
G248955 NA non-coding downstream 3359 1617451 ~ 1617654 (-)
G248943 NA non-coding downstream 11196 1605938 ~ 1609817 (-)
G248916 NA non-coding downstream 122796 1446661 ~ 1498217 (-)
G248914 NA non-coding downstream 186084 1431615 ~ 1434929 (-)
G248901 NA non-coding downstream 219271 1401538 ~ 1401742 (-)
G249014 NA non-coding upstream 133008 1755961 ~ 1768102 (-)
G249024 NA non-coding upstream 167781 1790734 ~ 1791212 (-)
G249077 NA non-coding upstream 201061 1824014 ~ 1824332 (-)
G249078 NA non-coding upstream 202322 1825275 ~ 1825552 (-)
G249082 NA non-coding upstream 206489 1829442 ~ 1829792 (-)
G247592 NA other downstream 966064 646443 ~ 654949 (-)
CI01000058_02859435_02860658 FAM72A other upstream 1235530 2858483 ~ 2861491 (-)
G250230 NA other upstream 2065690 3688643 ~ 3696711 (-)

Expression



Co-expression Network