Gene
RNA
| Item | Value |
|---|---|
| gene id | G248303 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000058 |
| NCBI id | null |
| chromosome length | 5213219 |
| location | 2236910 ~ 2237958 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU281828 | False | 353 | lncRNA | 0.44 | 2 | 2236910 | 2237437 |
| TU281829 | True | 266 | lncRNA | 0.48 | 3 | 2236910 | 2237958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000058_02227590_02229507 | MYOG | coding | upstream | 6889 | 2227418 ~ 2230021 (+) |
| CI01000058_02052152_02085378 | NA | coding | upstream | 151455 | 2051963 ~ 2085455 (+) |
| CI01000058_02028188_02037502 | MDM4 | coding | upstream | 199282 | 2028149 ~ 2037628 (+) |
| CI01000058_01957358_02009847 | ATP2B4 | coding | upstream | 227063 | 1957358 ~ 2009847 (+) |
| CI01000058_01838039_01842964 | NA | coding | upstream | 393680 | 1838039 ~ 1843230 (+) |
| CI01000058_02348646_02354404 | TMEM183A | coding | downstream | 110657 | 2348615 ~ 2355085 (+) |
| CI01000058_02379628_02392648 | NA | coding | downstream | 140626 | 2378584 ~ 2392780 (+) |
| CI01000058_02578534_02589495 | NA | coding | downstream | 340103 | 2578061 ~ 2590541 (+) |
| CI01000058_02592534_02600835 | NA | coding | downstream | 353235 | 2591193 ~ 2601755 (+) |
| CI01000058_02629861_02631891 | NA | coding | downstream | 391732 | 2629690 ~ 2632294 (+) |
| G248208 | NA | non-coding | upstream | 144180 | 2090257 ~ 2092730 (+) |
| G247969 | NA | non-coding | upstream | 180619 | 2003297 ~ 2056291 (+) |
| G247991 | NA | non-coding | upstream | 233743 | 1998870 ~ 2003167 (+) |
| G247950 | NA | non-coding | upstream | 295642 | 1927222 ~ 1941268 (+) |
| G248356 | NA | non-coding | downstream | 79260 | 2317218 ~ 2321912 (+) |
| G248372 | NA | non-coding | downstream | 160728 | 2398686 ~ 2398891 (+) |
| G248373 | NA | non-coding | downstream | 162427 | 2400385 ~ 2400642 (+) |
| G248374 | NA | non-coding | downstream | 163905 | 2401863 ~ 2402123 (+) |
| G248384 | NA | non-coding | downstream | 178295 | 2416253 ~ 2416481 (+) |
| CI01000058_01794468_01800421 | KISS1 | other | upstream | 439178 | 1794468 ~ 1800421 (+) |
| G247940 | NA | other | upstream | 780463 | 1452997 ~ 1456447 (+) |
| CI01000058_01280337_01289153 | DNASE2B | other | upstream | 948640 | 1278592 ~ 1289874 (+) |
| CI01000058_00592498_00596709 | NA | other | upstream | 1639739 | 592331 ~ 597171 (+) |
| CI01000058_00435196_00437830 | AGTRAP | other | upstream | 1781166 | 434913 ~ 455744 (+) |
| G250039 | NA | other | downstream | 2456450 | 4694408 ~ 4697161 (+) |
| CI01000058_04864571_04888198 | NA | other | downstream | 2588418 | 4864571 ~ 4888216 (+) |
