G248356


Basic Information

Item Value
gene id G248356
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2317218 ~ 2321912 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281885
GGTTAGTTCACCCAAAAATGAAAATAATGTAATTTATTACTCACCCTCATGCCGTTCCACACTCGTAAGACCTTCGTTAATCTTCGGAACACAAATTAAGATATTTTTTTGTTGAAATCCGATGGCTCAGTGAGGCCTGCACAGCCAGCAATGACATTTCCTCTCTCAAGATTCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGAAATGAGAATATTTTTGGTGTGCCAAAAAAACAAAATAACGACTTATATAGTGATGGCCGATTTCAAAACACAGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281885 True 320 lncRNA 0.34 2 2317218 2321912

Neighbor

gene id symbol gene type direction distance location
CI01000058_02227590_02229507 MYOG coding upstream 87197 2227418 ~ 2230021 (+)
CI01000058_02052152_02085378 NA coding upstream 231763 2051963 ~ 2085455 (+)
CI01000058_02028188_02037502 MDM4 coding upstream 279590 2028149 ~ 2037628 (+)
CI01000058_01957358_02009847 ATP2B4 coding upstream 307371 1957358 ~ 2009847 (+)
CI01000058_01838039_01842964 NA coding upstream 473988 1838039 ~ 1843230 (+)
CI01000058_02348646_02354404 TMEM183A coding downstream 26703 2348615 ~ 2355085 (+)
CI01000058_02379628_02392648 NA coding downstream 56672 2378584 ~ 2392780 (+)
CI01000058_02578534_02589495 NA coding downstream 256149 2578061 ~ 2590541 (+)
CI01000058_02592534_02600835 NA coding downstream 269281 2591193 ~ 2601755 (+)
CI01000058_02629861_02631891 NA coding downstream 307778 2629690 ~ 2632294 (+)
G248173 NA non-coding upstream 36400 2042171 ~ 2280818 (+)
G248303 NA non-coding upstream 79260 2236910 ~ 2237958 (+)
G248208 NA non-coding upstream 224488 2090257 ~ 2092730 (+)
G247969 NA non-coding upstream 260927 2003297 ~ 2056291 (+)
G248372 NA non-coding downstream 76774 2398686 ~ 2398891 (+)
G248373 NA non-coding downstream 78473 2400385 ~ 2400642 (+)
G248374 NA non-coding downstream 79951 2401863 ~ 2402123 (+)
G248384 NA non-coding downstream 94341 2416253 ~ 2416481 (+)
G248404 NA non-coding downstream 133775 2455687 ~ 2456585 (+)
CI01000058_01794468_01800421 KISS1 other upstream 519486 1794468 ~ 1800421 (+)
G247940 NA other upstream 860771 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 1028948 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 1720047 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 1861474 434913 ~ 455744 (+)
G250039 NA other downstream 2372496 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 2504464 4864571 ~ 4888216 (+)

Expression


Co-expression Network