G248406


Basic Information

Item Value
gene id G248406
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2460916 ~ 2461548 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281935
CTCAGAGCTCGAGGCCAGTGGCTTTTTCACGCCAGGGTTATTAATCTATGATTTTCATCACAGCTGGCGACCCCTTCACCTCCATTATAATGCGCTCTTTGTAATTTCATAGTTAATATTCAATAGCCACTTGTCCTCTGTTGCTGAATTGAGTGAATATCTGGATGGGAGTTGTGTCCTAGTATGAATACACTCATGAGAAAACGAGAAACTGTACAAATGCATTGTATATGAAGACACTGGATTCCTCAAAACAGATGCAGATGTTCAAGAATATGTTTAACCTTTCCCCTCCACTGAATGGCTCCTCTGTTTCATGCAAACATTTAGAGACCAGAGCTGCTCTGACCACCAGGTTAAAACTGTGAACTCCCTATCTATAGATGTGTGTGGTTAAGACTCAACCAGGGATAGAATCTACCACCCACAACCATATTTATAGAACATACACTTGAAAGAGAGAGAAAAACAAGGAGAGAGAGCCAAAGTGAGCAAGAGATGTAACAGAGAAGCTCTTATCACATACTGCACTGTTGCCTCGAACAGACATTCCTCCTCAACGACTTTGGCAGCCTTTTAAGAGCCTATTAAACCGCACTGTTTTCTGTTGCCCAAACCTCACAGAGCTTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281935 True 633 lncRNA 0.42 1 2460916 2461548

Neighbor

gene id symbol gene type direction distance location
CI01000058_02379628_02392648 NA coding upstream 68136 2378584 ~ 2392780 (+)
CI01000058_02348646_02354404 TMEM183A coding upstream 105831 2348615 ~ 2355085 (+)
CI01000058_02227590_02229507 MYOG coding upstream 230895 2227418 ~ 2230021 (+)
CI01000058_02052152_02085378 NA coding upstream 375461 2051963 ~ 2085455 (+)
CI01000058_02028188_02037502 MDM4 coding upstream 423288 2028149 ~ 2037628 (+)
CI01000058_02578534_02589495 NA coding downstream 116513 2578061 ~ 2590541 (+)
CI01000058_02592534_02600835 NA coding downstream 129645 2591193 ~ 2601755 (+)
CI01000058_02629861_02631891 NA coding downstream 168142 2629690 ~ 2632294 (+)
CI01000058_02635467_02636768 NA coding downstream 173628 2635176 ~ 2636985 (+)
CI01000058_02650808_02653235 NA coding downstream 188888 2650436 ~ 2653371 (+)
G248405 NA non-coding upstream 1519 2459047 ~ 2459397 (+)
G248404 NA non-coding upstream 4331 2455687 ~ 2456585 (+)
G248384 NA non-coding upstream 44435 2416253 ~ 2416481 (+)
G248374 NA non-coding upstream 58793 2401863 ~ 2402123 (+)
G248373 NA non-coding upstream 60274 2400385 ~ 2400642 (+)
G248432 NA non-coding downstream 38562 2500110 ~ 2500317 (+)
G248516 NA non-coding downstream 211827 2673375 ~ 2673662 (+)
G248519 NA non-coding downstream 223727 2685275 ~ 2685634 (+)
G248574 NA non-coding downstream 405674 2867222 ~ 2878788 (+)
CI01000058_01794468_01800421 KISS1 other upstream 663184 1794468 ~ 1800421 (+)
G247940 NA other upstream 1004469 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 1172646 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 1863745 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 2005172 434913 ~ 455744 (+)
G250039 NA other downstream 2232860 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 2364828 4864571 ~ 4888216 (+)

Expression


Co-expression Network