Gene
RNA
| Item | Value |
|---|---|
| gene id | G248614 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000058 |
| NCBI id | null |
| chromosome length | 5213219 |
| location | 3109009 ~ 3109249 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU282150 | True | 241 | lncRNA | 0.34 | 1 | 3109009 | 3109249 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000058_03066079_03101574 | MAPKAPK2.S, MAPKAPK2, MAPKAPK2A | coding | upstream | 7435 | 3066079 ~ 3101574 (+) |
| CI01000058_03034418_03038200 | DYRK3 | coding | upstream | 70665 | 3034418 ~ 3038344 (+) |
| CI01000058_02979997_03027744 | RASSF5 | coding | upstream | 80865 | 2979997 ~ 3028144 (+) |
| CI01000058_02964886_02978501 | IKBKE | coding | upstream | 130114 | 2964886 ~ 2978895 (+) |
| CI01000058_02911431_02958568 | SRGAP2 | coding | upstream | 150441 | 2911431 ~ 2958568 (+) |
| CI01000058_03169524_03172961 | FMODA | coding | downstream | 59796 | 3169045 ~ 3173702 (+) |
| CI01000058_03181624_03193630 | SLC6A14 | coding | downstream | 72171 | 3181420 ~ 3195924 (+) |
| CI01000058_03201861_03220295 | TAF4A, TAF4 | coding | downstream | 91733 | 3200982 ~ 3220724 (+) |
| CI01000058_03503653_03506062 | NA | coding | downstream | 394129 | 3503378 ~ 3506296 (+) |
| CI01000058_03644271_03645229 | NA | coding | downstream | 535022 | 3644271 ~ 3645229 (+) |
| G248613 | NA | non-coding | upstream | 855 | 3107773 ~ 3108154 (+) |
| G248594 | NA | non-coding | upstream | 144186 | 2964493 ~ 2964823 (+) |
| G248566 | NA | non-coding | upstream | 200812 | 2891351 ~ 2908197 (+) |
| G248574 | NA | non-coding | upstream | 230221 | 2867222 ~ 2878788 (+) |
| G248519 | NA | non-coding | upstream | 423375 | 2685275 ~ 2685634 (+) |
| G248568 | NA | non-coding | downstream | 2535 | 3111784 ~ 3114371 (+) |
| G248618 | NA | non-coding | downstream | 9819 | 3119068 ~ 3119298 (+) |
| G248560 | NA | non-coding | downstream | 27049 | 3136298 ~ 3141022 (+) |
| G248575 | NA | non-coding | downstream | 40696 | 3149945 ~ 3150383 (+) |
| G248622 | NA | non-coding | downstream | 42001 | 3151250 ~ 3151831 (+) |
| CI01000058_01794468_01800421 | KISS1 | other | upstream | 1311277 | 1794468 ~ 1800421 (+) |
| G247940 | NA | other | upstream | 1652562 | 1452997 ~ 1456447 (+) |
| CI01000058_01280337_01289153 | DNASE2B | other | upstream | 1820739 | 1278592 ~ 1289874 (+) |
| CI01000058_00592498_00596709 | NA | other | upstream | 2511838 | 592331 ~ 597171 (+) |
| CI01000058_00435196_00437830 | AGTRAP | other | upstream | 2653265 | 434913 ~ 455744 (+) |
| G250039 | NA | other | downstream | 1585159 | 4694408 ~ 4697161 (+) |
| CI01000058_04864571_04888198 | NA | other | downstream | 1717127 | 4864571 ~ 4888216 (+) |
