Gene
RNA
| Item | Value |
|---|---|
| gene id | G250260 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000058 |
| NCBI id | null |
| chromosome length | 5213219 |
| location | 3654062 ~ 3654576 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU284020 | True | 515 | lncRNA | 0.45 | 1 | 3654062 | 3654576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000058_03239666_03330001 | CDH4 | coding | downstream | 324061 | 3239666 ~ 3330003 (-) |
| CI01000058_03154548_03160071 | NA | coding | downstream | 493991 | 3154539 ~ 3160071 (-) |
| CI01000058_03136045_03137264 | PRELP | coding | downstream | 516798 | 3135699 ~ 3137264 (-) |
| CI01000058_03128328_03131680 | NA | coding | downstream | 522200 | 3128275 ~ 3131862 (-) |
| CI01000058_03112748_03117231 | IL10 | coding | downstream | 536831 | 3112232 ~ 3117231 (-) |
| CI01000058_03668662_03671701 | FEZF2 | coding | upstream | 13970 | 3668546 ~ 3672185 (-) |
| CI01000058_03684461_03827727 | CADPS, CADPSA | coding | upstream | 29885 | 3684461 ~ 3827727 (-) |
| CI01000058_03904018_03906800 | THOC7 | coding | upstream | 249321 | 3903897 ~ 3908108 (-) |
| CI01000058_03950901_03956376 | PSMD6 | coding | upstream | 296325 | 3950901 ~ 3956376 (-) |
| CI01000058_03977379_03991942 | PRICKLE2, PRICKLE2B | coding | upstream | 322288 | 3976864 ~ 3991942 (-) |
| G250259 | NA | non-coding | downstream | 72 | 3653681 ~ 3653990 (-) |
| G250225 | NA | non-coding | downstream | 14156 | 3639173 ~ 3639906 (-) |
| G250257 | NA | non-coding | downstream | 16965 | 3636813 ~ 3637097 (-) |
| G250251 | NA | non-coding | downstream | 46228 | 3607612 ~ 3607834 (-) |
| G250250 | NA | non-coding | downstream | 48578 | 3605273 ~ 3605484 (-) |
| G250268 | NA | non-coding | upstream | 19160 | 3673736 ~ 3673966 (-) |
| G250238 | NA | non-coding | upstream | 140068 | 3794644 ~ 3879551 (-) |
| G250231 | NA | non-coding | upstream | 180481 | 3835057 ~ 3838932 (-) |
| G250227 | NA | non-coding | upstream | 184503 | 3839079 ~ 3851329 (-) |
| CI01000058_02859435_02860658 | FAM72A | other | downstream | 792869 | 2858483 ~ 2861491 (-) |
| G247592 | NA | other | downstream | 2999113 | 646443 ~ 654949 (-) |
| G250230 | NA | other | upstream | 34067 | 3688643 ~ 3696711 (-) |
