G249899


Basic Information

Item Value
gene id G249899
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4240237 ~ 4240895 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283597
GATATATGATATGATCATGTAAAAAATTAAATATTGTAGTAGATTTTTTTTAATATATTTTGTAAACAGGCCTTGCATCACATATTTCCTTCTTTCCTTTTTTTCTCCACACATTCTATTCGAGTGGACTCCGATAACCCTAGAGCATGTTTATTAGACATCATGATCAATCATAATATCATCCACACACACACAGCACTTTTACGGATGTGAAGTGCATTTGCCCCTTGCGTTGTACCTGTAATCAATATCTCTCCTGTCATAAAGCACGTCTTGTCAACACAACTGTATTTGTTTGCACATGGACACTGGGGTCTTCTGCAGCTATTTGTGATGCTGAAGGTTAAGACGGTGGCCTGGCAGTCAACACGTGTCTCACACACTCATCCTGCTGTGTGCTGTATCTCCCCATCACTTGATGGAACTGATGAATAGCTGATATAAATAGCACCCCGCGATGGGAGATGCTCTTTGGCAGCCATCTTAGTGACACTGGTAATAAATCAAAGATGTGATGATAACTCAGTTTTCTTAACAACCTCGCTATGTAATATTCTCTTTGGTTTACAGGCTCTATCGACAGTGAGCATAGTGTAAAACACAAGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283597 True 609 lncRNA 0.40 2 4240237 4240895

Neighbor

gene id symbol gene type direction distance location
CI01000058_04174884_04175951 RHOL coding upstream 63407 4174800 ~ 4176830 (+)
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 274639 3959155 ~ 3965598 (+)
CI01000058_03915537_03946197 ATXN7 coding upstream 292164 3914922 ~ 3948073 (+)
CI01000058_03889526_03896649 SYNPR coding upstream 343482 3889314 ~ 3896755 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding upstream 389514 3846867 ~ 3850723 (+)
CI01000058_04263520_04265153 NA coding downstream 22229 4263124 ~ 4265628 (+)
CI01000058_04272001_04275349 NA coding downstream 31011 4271906 ~ 4275431 (+)
CI01000058_04303891_04308850 NA coding downstream 62909 4303804 ~ 4308997 (+)
CI01000058_04344622_04358133 NA coding downstream 102126 4343021 ~ 4358133 (+)
CI01000058_04360496_04365634 PFKFB2, F262 coding downstream 119601 4360496 ~ 4366118 (+)
G249886 NA non-coding upstream 21468 4217928 ~ 4218769 (+)
G249873 NA non-coding upstream 69145 4170590 ~ 4171092 (+)
G249869 NA non-coding upstream 85746 4154247 ~ 4154491 (+)
G249839 NA non-coding upstream 123845 4115652 ~ 4116392 (+)
G249776 NA non-coding upstream 185790 4024700 ~ 4054447 (+)
G249970 NA non-coding downstream 99877 4340772 ~ 4340984 (+)
G249981 NA non-coding downstream 122812 4363707 ~ 4413637 (+)
G249980 NA non-coding downstream 177030 4417925 ~ 4418264 (+)
G249979 NA non-coding downstream 179453 4420348 ~ 4420792 (+)
G250013 NA non-coding downstream 210632 4451527 ~ 4452571 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2442505 1794468 ~ 1800421 (+)
G247940 NA other upstream 2783790 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2951967 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3643066 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3784493 434913 ~ 455744 (+)
G250039 NA other downstream 453513 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 585481 4864571 ~ 4888216 (+)

Expression


Co-expression Network