G249970


Basic Information

Item Value
gene id G249970
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4340772 ~ 4340984 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283668
ATTGGACTGTGGAAACTAGGACTTTTCTTTTTCTTAGTTTCTGAATGTATTGTCAAACAGCATATATAGGCTATGAGTGTTGGAGGGTTTTTATTTTGGAATTCAGCAGCAGACAGTGTGAGACTGTGAGGTGTACTATCATTTTCAGGTGAAATTGGGCTGTGAAATATTATTTATATTTATTTATTTAGGCCTGTTTTTTTTTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283668 True 213 lncRNA 0.32 1 4340772 4340984

Neighbor

gene id symbol gene type direction distance location
CI01000058_04303891_04308850 NA coding upstream 31775 4303804 ~ 4308997 (+)
CI01000058_04272001_04275349 NA coding upstream 65341 4271906 ~ 4275431 (+)
CI01000058_04263520_04265153 NA coding upstream 75144 4263124 ~ 4265628 (+)
CI01000058_04174884_04175951 RHOL coding upstream 163942 4174800 ~ 4176830 (+)
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 375174 3959155 ~ 3965598 (+)
CI01000058_04344622_04358133 NA coding downstream 2037 4343021 ~ 4358133 (+)
CI01000058_04360496_04365634 PFKFB2, F262 coding downstream 19512 4360496 ~ 4366118 (+)
CI01000058_04405407_04408449 ID1 coding downstream 64423 4405407 ~ 4409395 (+)
CI01000058_04466648_04523385 ZMYND8 coding downstream 125212 4466196 ~ 4523483 (+)
CI01000058_04556260_04565696 FGD5A coding downstream 215173 4556157 ~ 4566008 (+)
G249899 NA non-coding upstream 99877 4240237 ~ 4240895 (+)
G249886 NA non-coding upstream 122003 4217928 ~ 4218769 (+)
G249873 NA non-coding upstream 169680 4170590 ~ 4171092 (+)
G249869 NA non-coding upstream 186281 4154247 ~ 4154491 (+)
G249839 NA non-coding upstream 224380 4115652 ~ 4116392 (+)
G249981 NA non-coding downstream 22723 4363707 ~ 4413637 (+)
G249980 NA non-coding downstream 76941 4417925 ~ 4418264 (+)
G249979 NA non-coding downstream 79364 4420348 ~ 4420792 (+)
G250013 NA non-coding downstream 110543 4451527 ~ 4452571 (+)
G250035 NA non-coding downstream 201015 4541999 ~ 4542243 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2543040 1794468 ~ 1800421 (+)
G247940 NA other upstream 2884325 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3052502 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3743601 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3885028 434913 ~ 455744 (+)
G250039 NA other downstream 353424 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 485392 4864571 ~ 4888216 (+)

Expression


Co-expression Network