Gene
RNA
| Item | Value |
|---|---|
| gene id | G250013 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000058 |
| NCBI id | null |
| chromosome length | 5213219 |
| location | 4451527 ~ 4452571 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU283723 | True | 730 | lncRNA | 0.39 | 2 | 4451527 | 4452571 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000058_04405407_04408449 | ID1 | coding | upstream | 42132 | 4405407 ~ 4409395 (+) |
| CI01000058_04360496_04365634 | PFKFB2, F262 | coding | upstream | 85409 | 4360496 ~ 4366118 (+) |
| CI01000058_04344622_04358133 | NA | coding | upstream | 93394 | 4343021 ~ 4358133 (+) |
| CI01000058_04303891_04308850 | NA | coding | upstream | 142530 | 4303804 ~ 4308997 (+) |
| CI01000058_04272001_04275349 | NA | coding | upstream | 176096 | 4271906 ~ 4275431 (+) |
| CI01000058_04466648_04523385 | ZMYND8 | coding | downstream | 13625 | 4466196 ~ 4523483 (+) |
| CI01000058_04556260_04565696 | FGD5A | coding | downstream | 103586 | 4556157 ~ 4566008 (+) |
| CI01000058_04584028_04613429 | FGD5A | coding | downstream | 131457 | 4584028 ~ 4613747 (+) |
| CI01000058_04637318_04650366 | PRKCDB, PRKCD, PRKCDA | coding | downstream | 184647 | 4637218 ~ 4650506 (+) |
| CI01000058_04656762_04675421 | SFMBT1 | coding | downstream | 203745 | 4656316 ~ 4676097 (+) |
| G249979 | NA | non-coding | upstream | 30735 | 4420348 ~ 4420792 (+) |
| G249980 | NA | non-coding | upstream | 33263 | 4417925 ~ 4418264 (+) |
| G249981 | NA | non-coding | upstream | 37890 | 4363707 ~ 4413637 (+) |
| G249970 | NA | non-coding | upstream | 110543 | 4340772 ~ 4340984 (+) |
| G249899 | NA | non-coding | upstream | 210632 | 4240237 ~ 4240895 (+) |
| G250035 | NA | non-coding | downstream | 89428 | 4541999 ~ 4542243 (+) |
| G250049 | NA | non-coding | downstream | 224342 | 4676913 ~ 4677151 (+) |
| CI01000058_04678629_04687645 | TMEM110 | non-coding | downstream | 234064 | 4678102 ~ 4689520 (+) |
| G250075 | NA | non-coding | downstream | 275238 | 4727809 ~ 4738445 (+) |
| G250098 | NA | non-coding | downstream | 431434 | 4884005 ~ 4884279 (+) |
| CI01000058_01794468_01800421 | KISS1 | other | upstream | 2653795 | 1794468 ~ 1800421 (+) |
| G247940 | NA | other | upstream | 2995080 | 1452997 ~ 1456447 (+) |
| CI01000058_01280337_01289153 | DNASE2B | other | upstream | 3163257 | 1278592 ~ 1289874 (+) |
| CI01000058_00592498_00596709 | NA | other | upstream | 3854356 | 592331 ~ 597171 (+) |
| CI01000058_00435196_00437830 | AGTRAP | other | upstream | 3995783 | 434913 ~ 455744 (+) |
| G250039 | NA | other | downstream | 241837 | 4694408 ~ 4697161 (+) |
| CI01000058_04864571_04888198 | NA | other | downstream | 373805 | 4864571 ~ 4888216 (+) |
