G250035


Basic Information

Item Value
gene id G250035
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4541999 ~ 4542243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283764
GTTGGGCTTGGCCTCTTAGTTCCAGGGAAAGGAACTCTTAATGCTTCAGCATACCAAGACATTTTGGACAATTTCATGCTCCCAACTTTGTGGGAACAGTTTGGGGATGGCCCCTTCCTGTTCCAACATGACTGCGCACCAGTGCACAAAGCAAGGTCCATAAAGACATGGATGAGTGAGTTTGGTGTGGAGGAACTTGACTGGCCTGCACAGAGTCCTGACCTCAACCCGACAAAACATCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283764 True 245 lncRNA 0.49 1 4541999 4542243

Neighbor

gene id symbol gene type direction distance location
CI01000058_04466648_04523385 ZMYND8 coding upstream 18516 4466196 ~ 4523483 (+)
CI01000058_04405407_04408449 ID1 coding upstream 132604 4405407 ~ 4409395 (+)
CI01000058_04360496_04365634 PFKFB2, F262 coding upstream 175881 4360496 ~ 4366118 (+)
CI01000058_04344622_04358133 NA coding upstream 183866 4343021 ~ 4358133 (+)
CI01000058_04303891_04308850 NA coding upstream 233002 4303804 ~ 4308997 (+)
CI01000058_04556260_04565696 FGD5A coding downstream 13914 4556157 ~ 4566008 (+)
CI01000058_04584028_04613429 FGD5A coding downstream 41785 4584028 ~ 4613747 (+)
CI01000058_04637318_04650366 PRKCDB, PRKCD, PRKCDA coding downstream 94975 4637218 ~ 4650506 (+)
CI01000058_04656762_04675421 SFMBT1 coding downstream 114073 4656316 ~ 4676097 (+)
CI01000058_04678629_04687645 TMEM110 coding downstream 135859 4678102 ~ 4689520 (+)
G250013 NA non-coding upstream 89428 4451527 ~ 4452571 (+)
G249979 NA non-coding upstream 121207 4420348 ~ 4420792 (+)
G249980 NA non-coding upstream 123735 4417925 ~ 4418264 (+)
G249981 NA non-coding upstream 128362 4363707 ~ 4413637 (+)
G249970 NA non-coding upstream 201015 4340772 ~ 4340984 (+)
G250049 NA non-coding downstream 134670 4676913 ~ 4677151 (+)
G250075 NA non-coding downstream 185566 4727809 ~ 4738445 (+)
G250098 NA non-coding downstream 341762 4884005 ~ 4884279 (+)
G250095 NA non-coding downstream 342219 4884462 ~ 4885100 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2744267 1794468 ~ 1800421 (+)
G247940 NA other upstream 3085552 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3253729 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3944828 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 4086255 434913 ~ 455744 (+)
G250039 NA other downstream 152165 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 284133 4864571 ~ 4888216 (+)

Expression


Co-expression Network