XLOC_010152


Basic Information

Item Value
gene id XLOC_010152
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 40082902 ~ 40114807 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022006
gttaagcactatgaatattttccggatgcactgtagaaTATGCAGTTACAGTTTTACAGTGAAAACATTCAGATTTTATaaatacccacatagcaaaatgtcTCTTGCCTAGCTCttgcccacacaatcaggttttgcttggcccacatgccgcagtgaattacggtacatgactgtaCCAAGTCTGGCTTTCAGACAAGGGCCAagcatggaccatatctgggccaagtgtCAGCCAAGTTAAGAATCCATAACTGatcctgaactgggccagatatgttggtgtgtcacgagtCACGACTACAGTGAAACACTCTGACAAACCAGGGTCATGTTTGATGCTGTATACCAGTGCCAGATAAATGcttgctgtgccagatttatgccaaatcagGACAAGAATTCTTTGCCACCTGGGTATGAACTCCAGCAAGGGCTAACCGTATGCTTTAATTTTACAGTTGCTAGGTTGTTATACCTAAGAGGAGCCACTCCAAATAATCGTGTCAATGACTTTTCATACATTTCCTTAAATAGGCTTTATGACAAAATCTCTTTACTACTTAAGTTTTttgacagcaaaaaaataaataaatctgttcatTCCAGCTGCCTCCATTATTATCTCACTTCCTCCCACTGGACATTCCACAACAGTTCCGACCTTTTCTCACTTCGCTGGAGTGGCTGGGATGCAATAACACTTTGATTATGAATTTCTTCTCCTTGAGAAAACCCAGACGAGTCTAGAACACACGCCATGCTTTGAAAAAGTGGAAACTGAGAGTCAATGACCGTCCTGTCGTACCATCACATCCTTTATCACATCCATTTCCTCTTAACCCGCCATGACCCCCAATTTACATAAGTCTTGCATTCTCTGATTTcgttaaaaaaatatctgttttcaACCCGTCGGTCAAAGTGGGTTTTATTGCCGCTAGAGTTACCACAAACTTCCCTTTCACCCCTTTCTGAGGCGAACTTGACAAACAttgacaaacaagaaaaaaatgtgttgttgacATTGATAATAAACTCGAAAGTCTCTAAAACATCTGCAAGGGAAGTTCGAGGGGAAAATGGCTTAACGACGGGCCGACATAATTACGCTCAATGAGGGGAACCTCTAACGCGTTCATCCCGCTGCATTTTAATGAGTCGTGGGTGCCAAGTGGCAACTGTGGTTCCCATCACACCAACCTCTGCATCTTTCTCTTTCCATTCCTATAGGCATAAACCAGGCTGACCAGTTTCAACAGTGGGGGAAAAGAAGAGCAACATATGAGGAGGAGAGAAGTCTAAGACCACACTGAAAACCCACACCAGGCCTTTCAATGGGATGAGAGTCATGAGCATCACGGACACAGAACAGAAGTGATATTGTCCACACGGAGAGCATGCTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022006 True 1406 lncRNA 0.43 3 40082902 40114807

Neighbor

gene id symbol gene type direction distance location
XLOC_010151 CT025588.3 coding upstream 846 40075545 ~ 40082056 (+)
XLOC_010150 trmt11 coding upstream 8757 40043673 ~ 40074145 (+)
XLOC_010149 hint3 coding upstream 51123 40024883 ~ 40031779 (+)
XLOC_010148 CT025588.2 coding upstream 70911 40011869 ~ 40011991 (+)
XLOC_010147 NA coding upstream 105514 39972169 ~ 39977388 (+)
XLOC_010153 NA coding downstream 16657 40131464 ~ 40339027 (+)
XLOC_010154 BX470182.2 coding downstream 68936 40183743 ~ 40183859 (+)
XLOC_010155 BX470182.1 coding downstream 102236 40217043 ~ 40220920 (+)
XLOC_010156 mettl6 coding downstream 225415 40340222 ~ 40345372 (+)
XLOC_010157 BX072576.2 coding downstream 231640 40346447 ~ 40354078 (+)
XLOC_010146 NA non-coding upstream 116527 39952357 ~ 39966375 (+)
XLOC_010145 NA non-coding upstream 180962 39857185 ~ 39901940 (+)
XLOC_010162 NA non-coding downstream 758434 40873241 ~ 40893518 (+)
XLOC_010163 NA non-coding downstream 826930 40941737 ~ 40945757 (+)

Expression


Co-expression Network