CI01000059_00101987_00103012


Basic Information

Item Value
gene id CI01000059_00101987_00103012
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 100962 ~ 103012 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00101987_00103012.mRNA
AACTTATTCATAAAGGCACCAAAGATGACCAGCGGGATTATCTGTTTTACCTTGCTGTAGCCAACTACAAGCTCAAGGAATATGAGAAAGCTCTGAAATACATCAGGACTTTACTGAAAAATGAACCTGGAAATTCTCAAGCTTTAGATCTGGAGAAATTCATTAATAAAACCATGAAGAAAGATGGGCTGATTGGAATGGCAATTGTTGGTGGCATTGGTCTGGGTTTGGCTGGATTGGCTGGTCTCATTGGTTTAGCTGTGGCTAAGAAATCTGCATAAGAGGATGAGCTGAGCCAAATCTTAATGCCTTAATCCCTGTTTTGGGTGTAGAACGGATGCAGAAAGGCCTGCTAAATATCAGTCATCCTGACACTGACAGAGAATAACTGAAGGAAGCCTTACAAGCTTCCTTCAGTTAAAGCCAGAAAAATCTCACACTTACAGCATAATGCTAAACAGAGCGGCACCTGTTCACATCGCTCTTATGAAAAGAAAAGGAACTCCAACAATATTTCAATATTTATTTCTGTCACAAAAGTGTAAAGGGGCTTTATGATATATAGTAGATGTTAAAACCTTTTTACTGTTTTAGCAAAATTATTCTTTGTAATTGTAACAATATACGCTTACTGAACACAAAAATGTGTATATACATGCATCAGCAGGTGTTTATTAGGTACATATTAAGGCATTATTTTCAAGTAAAAATGGAAAATGTATTGTTTAATATTTAATTCGCTTAAAAAAAAAAAAATAATGCTCTTTTTACTTAACCATTACCATGAGGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTATGTTTGCAGCATACACAACTTTTGTTACTTTTTTTTTTATTGAACAGATTCTAAGGCAATTTGGAATAGCATTTCTTTCTGATGTTAGAACCAGAAAAAAGCTTTCAGCTTAGACCAAATACTATAGCTATAAAAGCGTGCCATTTCTAAGTATCTAGTAATCTGTGTATATAGGTACAGAAGACAATCGAGAGTACAGAGGCTGACTGATATAAAATGTTATTGTTAAAAAGGTGTTTTTTGTTGTTGTTGTTGTTGTTGTTGGAAACATTTGAATGCAAAGTTTAAAGGCATAAATGTTTTCTTTTGTGTTTTTATTTTTGCACTAAGGCCCAGAGAAAATAGTTTGCTTCATGGTGGGTTGTGTTGCACTGAGATTATCTGATTGTTTTATTTTGATTTTGTTTTCTGATTTTATTTCAACAGTGCTTATTGCCAACTTTGAACACAGGCTGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00101987_00103012.mRNA True 1306 mRNA 0.35 3 100962 103012

Neighbor

gene id symbol gene type direction distance location
CI01000059_00075079_00094725 CLDN15B coding downstream 6237 75079 ~ 94725 (-)
CI01000059_00056355_00058350 NA coding downstream 42275 55972 ~ 58687 (-)
CI01000059_00013963_00014292 NA coding downstream 86617 13775 ~ 14345 (-)
CI01000059_00001701_00003260 NA coding downstream 96651 1695 ~ 4311 (-)
CI01000059_00130626_00143117 ARHGEF15 coding upstream 27194 130206 ~ 143117 (-)
CI01000059_00144949_00157845 GRK1B, GRK1 coding upstream 41321 144333 ~ 157885 (-)
CI01000059_00185897_00188899 SLC25A35 coding upstream 82825 185837 ~ 189044 (-)
CI01000059_00190249_00194415 NA coding upstream 87098 190110 ~ 194464 (-)
CI01000059_00196450_00199898 NA coding upstream 93253 196265 ~ 199898 (-)
G251314 NA non-coding downstream 1813 95696 ~ 99149 (-)
G251351 NA non-coding upstream 16712 119724 ~ 120008 (-)
G251335 NA non-coding upstream 46909 149921 ~ 150157 (-)
G251359 NA non-coding upstream 132375 235387 ~ 240320 (-)
G251360 NA non-coding upstream 140320 243332 ~ 243677 (-)
G251362 NA non-coding upstream 141430 244442 ~ 244659 (-)
CI01000059_00378673_00379901 NA other upstream 266919 378587 ~ 380137 (-)
CI01000059_01253451_01254823 NA other upstream 1148704 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1993685 2094279 ~ 2098985 (-)
G253013 NA other upstream 3368463 3471475 ~ 3471909 (-)
G253914 NA other upstream 4650526 4753538 ~ 4754082 (-)

Expression


Co-expression Network