CI01000059_00767393_00826328


Basic Information

Item Value
gene id CI01000059_00767393_00826328
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 765733 ~ 826581 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00767393_00826328.mRNA
ATTGGCTGATGGGCGGGGCTTGCTTAGCCAATGAGCGCAGACTTCAGTTAAAGACACTGCAGCGATGAGTTGAGCAGGGCGCGCTACAGTGCTGCACTACAAACTTCACTTTCAATGGCTGATAAACACTAATGTCAGTTAAAATTACAGCACCACAGTGAGGGAAGTTCTCTCGGGCGCTTAGCTGGAGCTCAGATAAGTTGTCCTTCAGCATGTCATTAGTTTAAGACAATTAACGAGATGTTTTAGGGCAATGGAGAGTGAGCAGTCAGAAACATTTGGAGGTGGCGGCGGAGACAATTCATCAGGCTCCGACACGCTGTCAGAAGGCGAGACGCGAACCGAGCCGTATGAACCCGAATTGCAATTTGAGGAATTTAAATGTCACTCCTCAGATTTTGTGGGTCTTGACGGAAAAGTGAAAGGAAATGATTCTGATGAATGCAGCGACGACATAAAAGCAAGAAATGGGGATGACCAAGATGAAGGAGAAAATGAAGGGGACGAGGATGAAATGCCGGATAACATCCTCTACCCCCCCTCCATGCCCTTCCGCAAGTCCAGCAACCCTGAGGTTTCTCACGGCTCCAGTTTAGCGCTGAAATTTAAACGACAACTCAGTGAAGATGGGAAACAGCTACGGAGAGGAAGCCTAGGGGGTGCTCTTACAGGGAAGTACCTGCTGCCATATGCCTCAACCCAGCAGGCATGGTCAGCCACAGGCTCAGAGACCACCAACCTGGTTCGCATGCGCTCCCAGACCCTAGGCAAATCTGCACCCTCTCTCACTGCCAGCCTGCTCTTTAAGACAGTAGCTATACCTCCTCCACGACCAGTGGTTCTTGGCGTGTTAATAAAAGTACAGTCAGGAGGTAACAGTCAGGATTTGAGCATCACTAGCCGGCCACCTCGCACTCCTCGGCGTCTGCGTTTCCTGGGAAGCAGCGCCCTTACCCGAAGCAGGTATGCTGGCACATCAGCCAGTGATCATGGTGGATATCTCTCCATTATATCAAGGGGATTTTGTGTTTACTATGCCTTCTACTTTTTATCGAGTCCTCTTCACAGGAACTCTGAGATGAAACATGTAATAGAGGAAACAAGAAAAAATGGATTGTGCTTCAGCAGAAATATTTGTCTGGGGGCCAATGGATCATATCCTTACGTCCCTGACAGACTCAGATGGGCTAGAATGGAGCTCGACCTCACAGACTCTCTCTCTCTCATGCCCATCTTCCATATGGAAGCCTCTCAAGTCTCCCACCCACTGAGAACAAAGAGGTCTCTCACATCCTGTCATGACCGTTGGCCAAAGCCTCCTACCTCACCTGCAATGACCTCATTGCTGCCCGTTTTCATCGTCCCCAGTCTTCATGTTCATCCTCATCAGTATCGGACAGGATGCACATGCACAATGTGATTTACGTACAAAACATCCTTTGTTGGTCCTGGAACTTCCTATCAAACAAATATAACCCTAACCACAACCCTAATCCTAATCTCCTCTATTTTACTAGACCTTATAACAAATCTTTAGACACATGGAAGAGGGCTCTCTGTTAGCATTTGCATTCATCTTAAAGGGAGTTGCGTGGCTAGTGCTTTGATTTAGTAAAAAGGCTGCTGGTTGGCCGTCAATAGAGAAGTATGGATTTTGTCCACAGAATGGTCATAATTATGCCATCTACCAGGAATTTGAGGGAACAAAAAAGATTTTGATGTGTAATGTATTGGAAGATTGTATTTTTTAGGGCTGTCCAAGTTAACTTAATTGAATAGTTCACCCAAAAAATGAAAATTGTCCAAACCCATGAGAGTTTTGATCATCTTTGGAACACAAATGAAAGTGTTTTTGAAACCTGAGAGATTTCTGTCCCCCCCATTGATAGTCCCTTCACCTACAACTTTTGTGATCTCAATCAACTTTAGAAGCATCAAAGTAATCCCTATGATGTATAGATATTGATTTATATGATGAATTTATGTGAACAGATAGGCTTTTATTCATATAAACATTGATCAACTCGCATACATGAAGAACATCAATTATTGTAAACACAGAAGCTCAACCATACTTGTTTGACACAAGAGAATAAACCTGAAGGTATGTATGTGTGCATACAGGTATGTGCAATTTTTTTTTTTTTTTTTTTTTTTTTAACACCAATAATTATCACCTTTATTTTAATTTAACTTTACAGGTTTTGTTTTACTTTCTAAAGACTGGTCAGAAATCATGACATTTTTTCAGTTATTTTATGTAGGCATTATTTTTAACTGTAAGAGATTGAAAAAAAAAAATAATACAAATAATTAATACAAATCTTTTGTAGCAAATTAGCTCAAAAAGGGAAATATGAATAATTAAGTATAACTTATTATAATTATAAATATTTTGATCAGTTGACAGAATTAACTTGCAGAATTATTACGATCAGTAAGCCTGTTCGACCAGGTCTAGCAACTCCCAAAAAAGGTTATTTTCATGGTCACAGAAAAATAACTTTTTCTTACTGGGTACAGTACTACTCGGAGCGTGTAGCTGTGATCGCATCGTTAAAGGGACTTTGTTTTGCAAGCATTGCCTACAGAATCAATACTCAGGTCGATGTGCACTATTTTTTTTTTTTATTACATGAACTAAATCACGAGCACGGGATATAACAGGCAGATACAACAACAGTCAGAGTATATTTAAAAAGTACAAATATTACAAGTGTTCTTTGGCCAAACGATCGATTTGTGTGAGGAACAGACCCAAAAGCGATCACCACATGCATCTACCATAAATCTCAGTTCCTGTGGACACATTCAAAAATTGCCACCAGAAAAAGCATTACGTCAGCTTTGATTGTGAAATGGCATTGGCTCTCATGTGTCTCGTGACCTACTGCTTCATGATAAAGGGAGTGTCTTTTGTATGACTGCATGCGTTTACAGAGCAGGATCATTTTCAGTGATTAAAACCTTAAGTTCACATATCTTCACAAAGATATATTGTATGGTTTCAGAAAACTTGTAATGCAACACAACTCGTTTGCAATAGTTTTATACTGTTTTTGGTCAGTTTTTGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00767393_00826328.mRNA True 3080 mRNA 0.41 7 765733 826581

Neighbor

gene id symbol gene type direction distance location
CI01000059_00697568_00720771 MAST4 coding downstream 44962 697568 ~ 720771 (-)
CI01000059_00570850_00600462 DKFZP459B1536, PIK3R1 coding downstream 164875 570850 ~ 600858 (-)
CI01000059_00513674_00528840 SLC30A5, CCNB1 coding downstream 235784 513469 ~ 529949 (-)
CI01000059_00476366_00482307 NA coding downstream 283426 475994 ~ 482307 (-)
CI01000059_00456370_00458895 NA coding downstream 306293 456284 ~ 459440 (-)
CI01000059_00853242_00855219 NA coding upstream 26173 852754 ~ 855284 (-)
CI01000059_00867492_00873239 NA coding upstream 40084 866665 ~ 873239 (-)
CI01000059_00991306_01000173 BMCC1, PRUNE2 coding upstream 164450 991031 ~ 1000173 (-)
CI01000059_01022397_01031991 NA coding upstream 195157 1021738 ~ 1032204 (-)
CI01000059_01042330_01049708 GNAQ, GNA11B, GNAQ.L, GNAQ.S, GNA11, GNA11.S coding upstream 215669 1042250 ~ 1049927 (-)
G251549 NA non-coding downstream 82716 682740 ~ 683017 (-)
G251540 NA non-coding downstream 87975 677515 ~ 677758 (-)
G251537 NA non-coding downstream 91289 674208 ~ 674444 (-)
G251534 NA non-coding downstream 95666 669223 ~ 670067 (-)
G251529 NA non-coding downstream 105493 660013 ~ 660240 (-)
G251569 NA non-coding upstream 60086 886667 ~ 886876 (-)
G251511 NA non-coding upstream 106909 933490 ~ 937795 (-)
G251583 NA non-coding upstream 113061 939642 ~ 939860 (-)
G251586 NA non-coding upstream 125563 952144 ~ 952360 (-)
G251587 NA non-coding upstream 128823 955404 ~ 955643 (-)
CI01000059_00378673_00379901 NA other downstream 385596 378587 ~ 380137 (-)
CI01000059_01253451_01254823 NA other upstream 425135 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1270116 2094279 ~ 2098985 (-)
G253013 NA other upstream 2644894 3471475 ~ 3471909 (-)
G253914 NA other upstream 3926957 4753538 ~ 4754082 (-)
G254203 NA other upstream 4411205 5237786 ~ 5238299 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031478 NA non-coding NC_007116.7 CM002889.2 54944713 ~ 55114917 (-)