CI01000059_00853242_00855219


Basic Information

Item Value
gene id CI01000059_00853242_00855219
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 852754 ~ 855284 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00853242_00855219.mRNA
AGGTTCCACACAGGCCAGCGCTTCCGAGTCTCTTTCTTACGAACTCTCGGTCACTCGTCAACAAAATGGACGAAATACGACTAAGGATTACTTCTCCCTGCATTGATAGCTGCATTATGGTAATTACAGAGACTTGGCTGGACAGTGCTATCCCTGATTCCGCCATCGACCTAGATGGCCGCTCCGTTTATCGAGCGGATAGAACGGCCGACTCTGGTAAGAGTAAAGGCAGAGGAACATGCATATATGTTAATAATGCGTGGTGCATGTCTACGGATATAATTAAGACACATTGTTCTCCTGAAATTGAGTATTTGACTTTAAAATGCAGACCTTTTTACGCACCAAGAGATTTTACTGTTATTCTTATCACAGCTGTTTACATTCCACCACAGGCTAATGCTAAGCTAGCTCTGGAGGAGCTGCATAACACCATTAACAGCCAGCTGAATGCATATCCAGAGGCAGCTGTGATCATAGCAGTAGACTTTAATCATGTGGATCTTAAAATTGTAATGCCCAAATTATACAGCAATGTACATTTCCCAACCAGGGATAAGAATATACTTGACCAAGTGTACACTAATATCCCAGGAGCTTACAAAGCTATTCTATCTCCACATCTTGGCCTATCTGACCATATTTCAATAGAAATGATTCCATCCTACAGACCTCTCATTTGCAGAACACGACCAGCTGTTAAAACTGTCCAAGTCTGGAGGGAAGAGGCAATTTCACGATTGCAGGACTGTTTTGAAAATACAAACTGGGAGTTGTTTGCACAGAGTACAGACCTGGAGGAATATAGCTCATCCATTTTGGCTTACATAGCCTTCTGTGCTGATACTGTGCAGTCTGAAGAGACTGTCCCTATCATCTCCAAAGCAATCAAGTCAGTTCCAGTTACTAAGTCTGAGTCAACTACTCTCATTCCTGAACGGGACATGTCCACTTCGGTGATTCAAGAATCAGCTAGGTCAAGCGCAGTCTTCTCTCAGTCTAAGTCTGTTCCTGTCATTTCTGAGCCTGCTGGATATGTTTTTGTCACTGCTGAGTCAATGGAGTTAACTGCTATTCCGTCTGTGTTTGCCGAGTCAGCTACAGATACTACAGCGGAGGAAAAGAGAGGCCCAGTTACCAAGTCAGCCACTTCTGAGTCTGTTGAATTAACCTCTGTATTCCCAGTATCTGCCAAGAGTTTTCCTGTTATTCCTGAGCCTGTAAAGTCAAGTGTTGTCCCTCAGTCAATTAAGTCTTTTCTTGTTACATCAGAGTTTGAGTCAGCTTCATTTGCTGCTGATTCAACGGAGATCACTGCTGTTCCACCTGAGAACCCTGAGGTCCTGGAGGATGCGATTCTGTTTGTCTCAAGTCCAGTGGTTCCTGAGGTATCAAGTCCAGTGAAATTTTCAAAGCCACCTGCTAGTCATGTCTTGCCCTCAGAGACAGTTTCTGCCAGCCCTGTCATGTTCACAGAGGCCTCTTCTGGTCAGTCAATGCCTGCTGTTGTGGTCAAGGAGGCCATTTCCAAGCTGCCTGTTGTCATTGCTGCAGAGGCCTTTTCTGAATGTCTTACAAGTCTTGTCATGTCCACAGCAAGGATTCCTGTCAGTCCTGCCATGTCCACAGTAAAGATTTCTGTTGTGTCCACAAAGTATGAAATTCCTGGAAATAGAATTCCAGAGTCCGCTTGAGAGAGAGCAGTCCCAAGCCCTGCTCCGTTGAGAGCAGTTCCTGAGCCTGCTTCAGAGGAGGTTGTTCCTGAGCCTGCTGCAGAGAGAGCTGTTCCTGAGCTGCTGAGAAAGCTGTTCCCGAGTCTGCTCCAGAAGGAGATGCAATTCCTAAGCCCGCTCCAGAGAGAGCAGTCACAAAGCCCACTCCAGCTCCAGAGAGAGCATTCACAGAGCCTGCTCCTGCTCATGAAAGAGCAGTCACAGAGCTTGCTCTAGCCCCTGAGCCTGGTCCAGTGTCAGCTCCAGCCCCTGTATACTGTCCAGTTTTGGCTCCAGCCACTGAAGACAATTTTGAGTTTGTTTCTAAGTCTGATCCTGAAATTTCAAAGGGCACCCCAGAGTCTGTCTCCGAACCCATTTCCAAGACATTCTTCTTCCCTGCCAGTTCAGCCATTGCCCCTGATTTTGCCACTGCCACCAAGCCCAGTTGGAAGTCCAGACCAGTTAAA

Function

NR:

description
ReO_6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00853242_00855219.mRNA True 2182 mRNA 0.46 3 852754 855284

Neighbor

gene id symbol gene type direction distance location
CI01000059_00767393_00826328 NA coding downstream 26173 765733 ~ 826581 (-)
CI01000059_00697568_00720771 MAST4 coding downstream 131983 697568 ~ 720771 (-)
CI01000059_00570850_00600462 DKFZP459B1536, PIK3R1 coding downstream 251896 570850 ~ 600858 (-)
CI01000059_00513674_00528840 SLC30A5, CCNB1 coding downstream 322805 513469 ~ 529949 (-)
CI01000059_00476366_00482307 NA coding downstream 370447 475994 ~ 482307 (-)
CI01000059_00867492_00873239 NA coding upstream 11381 866665 ~ 873239 (-)
CI01000059_00991306_01000173 BMCC1, PRUNE2 coding upstream 135747 991031 ~ 1000173 (-)
CI01000059_01022397_01031991 NA coding upstream 166454 1021738 ~ 1032204 (-)
CI01000059_01042330_01049708 GNAQ, GNA11B, GNAQ.L, GNAQ.S, GNA11, GNA11.S coding upstream 186966 1042250 ~ 1049927 (-)
CI01000059_01062456_01073742 HNRPKL, HNRNPK coding upstream 207172 1062456 ~ 1073742 (-)
G251549 NA non-coding downstream 169737 682740 ~ 683017 (-)
G251540 NA non-coding downstream 174996 677515 ~ 677758 (-)
G251537 NA non-coding downstream 178310 674208 ~ 674444 (-)
G251534 NA non-coding downstream 182687 669223 ~ 670067 (-)
G251529 NA non-coding downstream 192514 660013 ~ 660240 (-)
G251569 NA non-coding upstream 31383 886667 ~ 886876 (-)
G251511 NA non-coding upstream 78206 933490 ~ 937795 (-)
G251583 NA non-coding upstream 84358 939642 ~ 939860 (-)
G251586 NA non-coding upstream 96860 952144 ~ 952360 (-)
G251587 NA non-coding upstream 100120 955404 ~ 955643 (-)
CI01000059_00378673_00379901 NA other downstream 472617 378587 ~ 380137 (-)
CI01000059_01253451_01254823 NA other upstream 396432 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1241413 2094279 ~ 2098985 (-)
G253013 NA other upstream 2616191 3471475 ~ 3471909 (-)
G253914 NA other upstream 3898254 4753538 ~ 4754082 (-)
G254203 NA other upstream 4382502 5237786 ~ 5238299 (-)

Expression


Co-expression Network