CI01000059_00867492_00873239


Basic Information

Item Value
gene id CI01000059_00867492_00873239
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 866665 ~ 873239 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_00867492_00873239.mRNA
GAAAAATCCCGGAAGAGGCAAAGGCGCTCTCGCTTTTGGCCCCTGCCGCACCCGTAGCCAGCCTGATGAGTGGAGGAGGACTTCTGCCCATTCCCAGCCCTGCTACGCTACAGAACCGAAGTCTTCCTTTAGCTAATCTGGGAGTCCTGAAGTCTAGTTTGGACACGTCTGTGGCGGCTCTGAGTGCAATCGCTTCGCAACCTCCGCTCATGGGTAATGTTGATCCCTCTAAAATTGACGAGATCAGGAGGACGGTGTATGTCGGCAATTTGAATTCACAGAGCACCACAGCAGAGCAGCTCCTCGAGTTCTTCAAGCAGGTGGGAGATGTGAAGTTTGTTAGAATGGCGGGAGATGAAACACAACCTACACGTTTTGCTTTTGTGGAGTTTTCTGATCAGGAATCAGTGGCACGAGCACTTACATTTAATGGAGTCATGTTTGGTGATAGGCCACTCAAAATTAACCACTCCAATAATGCCATAGTGAAGCCTCCAGAGCTCACGCCACAAGCTGCGGCCAAAGAGCTGGAGGACGTCATGAAGAAAACAATAAAAATCGCTCATCCAGTAGATCCAGACATTCCAGAAGGTCAAGAACTCGCTCTCGCTCCCCGTCACACTCACGAAAAAAGCGATCCAGGTCAAGGCACAGGGACCGAAGGAAGGACAAGGACGGTAAAGTTAGGAAGGGCGATGACTGGGATGAAAAGAGGTTGCGGGACAAAAAGGGAAGGACGCCTTCCAAAGGCTACGTTGGCTCCAGACGTTCCCGCAGTACAAGCAGACATAAAAAAAGAAGTAGATCTCGATCCAGGTCACCAAAGCGAAGCGCCAGAGGCAAGAAAGATAAAAAGAGAGATAAAGGATGGGACAGTAGCAGGGGAAGGATGGAGAGCTCAACGTCCAGGAGGAAAAGCAGGGACTCTGACCATAAATCTAAACCCTCACTGGTGTGTCTGATTTTTATTTTAAACAAGTAGCTCAATTTACACACGCATTGACCTTCATTCAGTAAAAATAATTTGTATTGGTGGATTGATGCAAAAATGTTGGTCTGAGGTTAGGTAACGCCCTTAATATTAACGTTAAATTAACACATATTACAGAGTTGTTCCTAGAAAATCTTTGTGTCATACTTTGTTTATAGCATCATGTAAGTACAATCACTTTGTTCACATTGTGAAACTACGTCATTACCAGGTACAGCTAAACTCTGGAGGCTTACTAACTAACAGTTAAACAGTGTGGTGGTAATCAGATAGTTGTGGGTTTCGTCGTGTTAGAATAGCTAATGTCAATAAGTCTGTATACCACTGTCACTTTCTTCTGGATTCAACACAATGGATCAATAACTGGTTTTCGTTGATGCTTTTGCAATTATATTAGTGATGTTTGAAAACTCTAAACCTAATGCTTATGATGGAGGACTCATTGTTCCTCGTGCACCTCAAAGAGCTCACTGCACGTTCAGATTAAATAATTTGCACAACATGTAGCTCAGCTGTATCGCAGTGTGCTGCTCTAGTTTTTATAGATAAGAAACAGAGGATCACAGCTGATTCTTGCAAAGATTGACTTTTAAAGACTTTTTCATGCTTGTCTGCCCCCGATAACTATCAGTATGACCGTTTTTACTGCTAAGCTTTTATATTTCCTCTAAATGTGGCATCTTTTTGATAAAGCGTGAACCGTTCTTACAGGATTTATCTTTTTGACATTTTTGCCATCTGATGAAAACACTTCTGACATGATTACTTAGTATATCAAAGTATCAGTCTGATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_00867492_00873239.mRNA True 1789 mRNA 0.43 8 866665 873239

Neighbor

gene id symbol gene type direction distance location
CI01000059_00853242_00855219 NA coding downstream 11381 852754 ~ 855284 (-)
CI01000059_00767393_00826328 NA coding downstream 40084 765733 ~ 826581 (-)
CI01000059_00697568_00720771 MAST4 coding downstream 145894 697568 ~ 720771 (-)
CI01000059_00570850_00600462 DKFZP459B1536, PIK3R1 coding downstream 265807 570850 ~ 600858 (-)
CI01000059_00513674_00528840 SLC30A5, CCNB1 coding downstream 336716 513469 ~ 529949 (-)
CI01000059_00991306_01000173 BMCC1, PRUNE2 coding upstream 117792 991031 ~ 1000173 (-)
CI01000059_01022397_01031991 NA coding upstream 148499 1021738 ~ 1032204 (-)
CI01000059_01042330_01049708 GNAQ, GNA11B, GNAQ.L, GNAQ.S, GNA11, GNA11.S coding upstream 169011 1042250 ~ 1049927 (-)
CI01000059_01062456_01073742 HNRPKL, HNRNPK coding upstream 189217 1062456 ~ 1073742 (-)
CI01000059_01118201_01130248 KCMF1, KCMF1.L, YOY6 coding upstream 244477 1117716 ~ 1130248 (-)
G251549 NA non-coding downstream 183648 682740 ~ 683017 (-)
G251540 NA non-coding downstream 188907 677515 ~ 677758 (-)
G251537 NA non-coding downstream 192221 674208 ~ 674444 (-)
G251534 NA non-coding downstream 196598 669223 ~ 670067 (-)
G251529 NA non-coding downstream 206425 660013 ~ 660240 (-)
G251569 NA non-coding upstream 13428 886667 ~ 886876 (-)
G251511 NA non-coding upstream 60251 933490 ~ 937795 (-)
G251583 NA non-coding upstream 66403 939642 ~ 939860 (-)
G251586 NA non-coding upstream 78905 952144 ~ 952360 (-)
G251587 NA non-coding upstream 82165 955404 ~ 955643 (-)
CI01000059_00378673_00379901 NA other downstream 486528 378587 ~ 380137 (-)
CI01000059_01253451_01254823 NA other upstream 378477 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1223458 2094279 ~ 2098985 (-)
G253013 NA other upstream 2598236 3471475 ~ 3471909 (-)
G253914 NA other upstream 3880299 4753538 ~ 4754082 (-)
G254203 NA other upstream 4364547 5237786 ~ 5238299 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031479 srek1 coding NC_007116.7 CM002889.2 55160348 ~ 55201172 (-)