CI01000059_01022397_01031991


Basic Information

Item Value
gene id CI01000059_01022397_01031991
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 1021738 ~ 1032204 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_01022397_01031991.mRNA
AGAGGAAAAAGGAAACAAATGCCTTACGTAACACTACCCATCCCCATCCATTGAATGAGGAAGAAACTTCACCTGTAAATTACAGTACATCAAGCCGCTCCTGAGGTAGGCGTGTTCCTATAGACTTTCTTGAAGATTGCTCTTTTAACACTGTTGAGTGGGTTGATGAATGTATTAACTGCAAAGTACTGGAGGAGGTTCAAGCTGTTCAGGATGGGGGACTGCTGCATGTCAGGTGAAGACAGGGAAAGTGCCAGGATTCACCATGAAATTGAGAGACAGCTTAGGATGGACAAAAAGGATGCATCCCGACAACTGAAACTTTTGCTTTTAGGTACAGGGGAGAGTGGGAAGAGTACTTTCATTAAGCAGATGAGAATTATACATGGCAGGGGCTACACAGAGGAAGACAAGAGGGCCTATGCCAAGCTGGTGTACCAGAATATCTTTGTTTCTATTCACAACTTGCTTCAAGCCATGGAGAACCTGAAAATCCATTTTGCTGATGGACAAAACACAACATATGCTGCAATGCTTAAAAAAGTGACCCCTGAAACAGTACTGTCACTGGAGGCTGAATATGCTGAAGCCATTAAGAGTGTGTGGAAAGACCAAGGAATGCAGAAATGCTTTGAACGCAGGAGAGAGTTCCAGTTGTCAGACTCTACCAAATATTACCTTGATGACATTGACAGAATATCTGCAGCCTTTTACTTGCCAACTCTGCAGGATATTCTACGAGTCCGAGTTCCAACCACAGGCATTATTGAGTACGTCTTTGACCTTCAGACTGTCATTTTCAGAATGGTTGATGTCGGAGGCCAAAAGTCAGAAAGACGGAAGTGGATCCATTGTTTTGAAAATGTCACTTCCATCATCTACCTGGTGGCTCTGAGCGAGTACGATCAGGTCTTATATGAGTGTGCGAAAGAGAACCGCATGGAGGAGAGTAAGGCACTTTTTAAGACAATCATCTCTTACCCCTGGTTCCAGGAGTCATCTATCATCCTCTTCCTCAATAAGACAGATATCCTGAAGGAGAAGATCTCAAAGTCAGACCTTGTAAATTTTTTTCCACAATATACAGGAGCCCCGAATGAGAAATTGAGCCCGTGGACAATCTGCCTAACTCATCCAGAGGAATTGATCGTGCTGGGGAATGGCCCTAAAAATGATGCAGAAGCTGCAATGAAGTTCATCTTGAGTATGTATGAAGAACAGAACAGGGACACACATAAACGCATCTACGCACATTTCACATGTGCAACTGACACTGAAAATATCCGCTTTGTTTTTAGCGCTGTGAAGGACACCATTATGCGGAACATCCTGTCCACATTTAACTTGGGTTAAGTGATAAAAGTGCTTTTATATATGGCTAGATTGAATGTTTGTTTTGTTTTTGTTTTTTACCTCTGAGTCAATTAAAATGTGAATGTGATCTGTGTGTGAGCGCTGGAATTATGTCAAAGTGCATTCTGTGAATTCTTCTTGCATTGGCGGAAATTCAAGTGAAAGTGTTTTAAAGTGTTTTAATTGTAAAATAAGTCAGTAACACTTTATTTTAGGGTATTTTAACTAGTTGCTTATTAGCATGCATATTACTAGAATATTAGCTGCTTATTAGTAATTAATAAGAACATATTAATGCCTTATTCTGCATGACCTTATTCTACATTTTTAATCCTACCCAATACCTAAACTTAACAACTAACTTACTAACTATTAATAAGCAGTAAATTAGGAGTTTATTGAGGGAAAGGTCGTAGTTAATAGTGAATACATCTTCCCTATACTAAAGTGTTACCAATAAGTCTTACAGGTTTGGAAAACAAAATGAGGGTAAGTAAATTTTAATAGATTTTTTTTTTTTTTTTTTTTTTTTTTATTGTCCCTGCTTTGTTCTTAGGGACAATATTTACACTCTGGATTTACAGGGACATTTTTTCTTTCCTTCATGACAGCATTTTTCTAATTATATTAAACATTATGCTTGATAGGCTCAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_01022397_01031991.mRNA True 2012 mRNA 0.39 8 1021738 1032204

Neighbor

gene id symbol gene type direction distance location
CI01000059_00991306_01000173 BMCC1, PRUNE2 coding downstream 21565 991031 ~ 1000173 (-)
CI01000059_00867492_00873239 NA coding downstream 148499 866665 ~ 873239 (-)
CI01000059_00853242_00855219 NA coding downstream 166454 852754 ~ 855284 (-)
CI01000059_00767393_00826328 NA coding downstream 195157 765733 ~ 826581 (-)
CI01000059_00697568_00720771 MAST4 coding downstream 300967 697568 ~ 720771 (-)
CI01000059_01042330_01049708 GNAQ, GNA11B, GNAQ.L, GNAQ.S, GNA11, GNA11.S coding upstream 10046 1042250 ~ 1049927 (-)
CI01000059_01062456_01073742 HNRPKL, HNRNPK coding upstream 30252 1062456 ~ 1073742 (-)
CI01000059_01118201_01130248 KCMF1, KCMF1.L, YOY6 coding upstream 85512 1117716 ~ 1130248 (-)
CI01000059_01144728_01188827 CAMK4.L, CAMK4 coding upstream 111920 1144124 ~ 1188827 (-)
CI01000059_01191120_01223818 WDR36 coding upstream 158200 1190404 ~ 1223818 (-)
G251593 NA non-coding downstream 47829 973553 ~ 973909 (-)
G251589 NA non-coding downstream 62301 959224 ~ 959437 (-)
G251587 NA non-coding downstream 66095 955404 ~ 955643 (-)
G251586 NA non-coding downstream 69378 952144 ~ 952360 (-)
G251583 NA non-coding downstream 81878 939642 ~ 939860 (-)
G251505 NA non-coding upstream 84145 1116349 ~ 1116684 (-)
G251510 NA non-coding upstream 144315 1176519 ~ 1185331 (-)
G251631 NA non-coding upstream 235660 1267864 ~ 1268136 (-)
CI01000059_01275053_01276421 NA non-coding upstream 244132 1274776 ~ 1276569 (-)
CI01000059_00378673_00379901 NA other downstream 641601 378587 ~ 380137 (-)
CI01000059_01253451_01254823 NA other upstream 219512 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1064493 2094279 ~ 2098985 (-)
G253013 NA other upstream 2439271 3471475 ~ 3471909 (-)
G253914 NA other upstream 3721334 4753538 ~ 4754082 (-)
G254203 NA other upstream 4205582 5237786 ~ 5238299 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031485 gna14 coding NC_007116.7 CM002889.2 55543580 ~ 55560937 (-)