XLOC_010157 (BX072576.2)


Basic Information

Item Value
gene id XLOC_010157
gene name BX072576.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 40346447 ~ 40354078 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020142
gacaaCGAATCGTTTTCCTTCTAGAACTTACACCCACAACAACCCGGAAGTCTCGTGTCCTTTGAGAGAACACGATTATGTGTTTACCGGGACACTATTTTGAATTCTGATCGAGTATGTCATTAATTTTATGATGCCTTTCTGAAccgataacaaaaataaaatccacACGTTTCCATGGTAACGGACGTGGCGTTCTCCATCGGACAATCATGGCGGATGATTTGGACGATTTACTTGATGAAGTCGAATCAAAGTTTTGTTGCAACACTTCGGAGTCTAAACAGACAAGCCGTGTTATGAAACATACGGATCAAAAGTGTGACAATCTCGAAGAAAGGAAACTGCCAAGAAAACAAGGACGTAAAAGAGTTGAAAATGAGATAGATATTGACGCTATGCTGCATGAAATACTGGATGATGATGTTGATACACCAACCAGCACACATGAACCCAGTCCAGCAAAGGCATCCTCAAGTGCTCAGACAATCTC
>TCONS_00020143
AACAACCCGGAAGTCTCGTGTCCTTTGAGAGAACACGATTATGTGTTTACCGGGACACTATTTTGAATTCTGATCGAGTATGTCATTAATTTTATGATGCCTTTCTGAAccgataacaaaaataaaatccacACGTTTCCATGGTAACGGACGTGGCGTTCTCCATCGGACAATCATGGCGGATGATTTGGACGATTTACTTGATGAAGTCGAATCAAAGTTTTGTTGCAACACTTCGGAGTCTAAACAGACAAGCCGTGTTATGAAACATACGGATCAAAAGTGTGACAATCTCGAAGAAAGGAAACTGCCAAGAAAACAAGGACGTAAAAGAGTTGAAAATGAGATAGATATTGACGCTATGCTGCATGAAATACTGGATGATGATGTTGATACACCAACCAGCACACATGAACCCAGTCCAGCAAAGGCATCCTCAAGTGCTCAGACAATCTCCAAGAAATGTTGCCCTGTGTTTCTTGGTGGAAGCTCTGTTGCACACGGCATTGGAACCAGCGTTTCCGAAAGGGCCTGCAATCGATTAAGATGTACATATTGCGACTTCAGCGTAATCACCTTTGATGATCATGAATGGGACTCGTCCTGTGACTATTTATTTTTCAGGAACAACATGCCGGATTACCACAAGCTGAAGGTGCATCTGAGGAGGAGAGCGGGTGTTCGTGCGTACGCCTGTCAGTGTAGCTGGATCTCAATTCTGACACTCTCACACCTCAGAGAACAACCACAGCTCAAGTGGGTTTGTGGGAAACACAGAGCATAAACTGCTTCATCTGATCAGAGTACGCCTGCTCTCCTGTTCACACAAGGAAATGCTGGACATTTTGACTTTGTGATGCTGGATAACAAAACCGCTTTCTTTTAAGAGTGTAGTTTGTGTGTGAACTTTTGTCTATGCTGCATTTCCTGTGGAATGATAAAGTGGCTGATTTACATTATATAAGCTGTATTAGTTTGATAAATGAACagctataatgtaaataaatattatatattaaacattttgcACAATTTAGAATTATTGGGTAAAAAAGAATGCtccatttacagttgaagtcagaattattagccctcctgtatattttcttccttaaatttctgtttaacgggcagaagattcttttaaacacatttgtaaacatattagttttaataactcatttctaatcaccgatctttgccataatgacagtaaataatactttactacatattttccaagacactagtattcagcttaaagtgacatttaaatctTAATTAGGTTAGTTAATTTGGGAAGTTAAAGTAATTAAGTTGTTCTGCAgtcaaatattgcttaaagggcacctatgatgtaagctgtttggatagaactgtgtttaggtatagtgtgtccactgtcatattagagtgatagaAACATTATAagcctctttttttaatttcctgtcgTAAAAATCCAAATCCCTCACATTTTGAGGCCCATCGCGACGTAGTagtgtggtttccccacccaccaaattgattgaccgccacatattaacatgtctctgtagtaaagcgtataatcatatcaacaagacaaaaCATGcacaaagaaactgggattatcAATCATCATtgaatgtgatcaagaatgagttttacaaatttaaaatgttttttaatgtttgtaataaattacagcaattatacggtctttatcaccacagccgcatgtcagtacaattatgaaagaagacgcttcaatcctggtttgagGAAATGAAATCCTTACATTTCATTAGTATAACGGATATCCGTACAGCAGaatattttaacatgcaaaatcagtgcaaagttaaacgcatgcgctgtgtgtgtgtgtgtgtgtgtgcataaacttTGTAACCACTTTGCAGAAAGTCTTGAATTAACTCcgcaacaaatacatcaaataatcattgggaaagttcttactgtagtatttctcacaaacgttacatgagatctgcttctgtcttgtctgtcactgtgctgtttatctgacgcaggcGAGGCGGatattgaggcacactctgacaggcataaAGGGACCGGTGGGCtgggagaaccagcattaaagtcacaggcaacaaaaactgtGACCGTGTCTTCAGAACACGAAAAATTCCAacattctgaaagctataataaataatcttatgggtgttttgagctgaaactttacagatgcATTTTAGAGACACATCCTAAAtcctgaaaaaggggtaaaatatgtgccTTTTAAGGGGCTactaatattgaccctaaaatgttctttaaaaattaaaagctgcttttattctagctcaaataaaccaaattagactttctccagaagaaaaaatattaaaagaattactgtgaaaagttccttgctctgttaaacgtcatttgggaaatatttgaaaaataaaacaactcagaggagggtgaataattctgacttcaactgtatgaagtTAGTTGAAGACTGCTTGATCACTGATAAGAATGTTTATTATAACGCTGATGAACAGTACAACTCTTCCAGAATATTCTTAAGAAATGCTCAGGTATTGCAAGGGCCCATCTGTGTTACATTCCACAGTTTTCAGGGATGTGCTGTTATGGATCATCTGtcctaaataaaaaatgcacGATGTTCACAAAGTAAACTCAATAAATCATATAAagaatgtttttgtgtttgtgttttccctttaACTAT
>TCONS_00020144
gataacaaaaataaaatccacACGTTTCCATGGTAACGGACGTGGCGTTCTCCATCGGACAATCATGGCGGATGATTTGGACGATTTACTTGATGAAGTCGAATCAAAGTTTTGTTGCAACACTTCGGAGTCTAAACAGACAAGCCGTGTTATGAAACATACGGATCAAAAGTGTGACAATCTCGAAGAAAGGAAACTGCCAAGAAAACAAGGACGTAAAAGAGTTGAAAATGAGATAGATATTGACGCTATGCTGCATGAAATACTGGATGATGATGTTGATACACCAACCAGCACACATCTGTAAAATCTTTTATGAACCAAACAGGAACCCAGTCCAGCAAAGGCATCCTCAAGTGCTCAGACAATCTCCAAGAAATGTTGCCCTGTGTTTCTTGGTGGAAGCTCTGTTGCACACGGCATTGGAACCAGCGTTTCCGAAAGGGCCTGCAATCGATTAAGATGTACATATTGCGACTTCAGCGTAATCACCTTTGATGATCATGAATGGGACTCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000090181

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020142 False 493 processed_transcript 0.41 3 40346447 40347376
TCONS_00020143 False 2734 lncRNA 0.37 6 40346484 40354078
TCONS_00020144 True 517 processed_transcript 0.43 5 40346595 40348954

Neighbor

gene id symbol gene type direction distance location
XLOC_010156 mettl6 coding upstream 1075 40340222 ~ 40345372 (+)
XLOC_010153 NA coding upstream 7420 40131464 ~ 40339027 (+)
XLOC_010155 BX470182.1 coding upstream 125527 40217043 ~ 40220920 (+)
XLOC_010154 BX470182.2 coding upstream 162588 40183743 ~ 40183859 (+)
XLOC_010152 NA coding upstream 231640 40082902 ~ 40114807 (+)
XLOC_010158 BX072576.1 coding downstream 109287 40463365 ~ 40464426 (+)
XLOC_010159 nagpa coding downstream 154804 40508882 ~ 40541981 (+)
XLOC_010160 tp53inp1 coding downstream 206544 40560622 ~ 40569769 (+)
XLOC_010161 ccne2 coding downstream 221664 40575742 ~ 40586793 (+)
XLOC_010162 NA coding downstream 519163 40873241 ~ 40893518 (+)
XLOC_010151 CT025588.3 non-coding upstream 264391 40075545 ~ 40082056 (+)
XLOC_010148 CT025588.2 non-coding upstream 334456 40011869 ~ 40011991 (+)
XLOC_010163 NA non-coding downstream 587659 40941737 ~ 40945757 (+)
XLOC_010166 NA non-coding downstream 682569 41036647 ~ 41054652 (+)
XLOC_010168 NA non-coding downstream 774986 41129064 ~ 41129320 (+)
XLOC_010170 NA non-coding downstream 788581 41142659 ~ 41148163 (+)

Expression


Co-expression Network