CI01000059_06537186_06537567


Basic Information

Item Value
gene id CI01000059_06537186_06537567
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 6537104 ~ 6539310 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_06537186_06537567.mRNA
AGTGGGATGTCTATACTGTAGCTTGGTTATGAGGATGAGTGTCTCTCAGCAGTGAGGTCCATGCCAGCCGGGACTTGAAAGCCTTAGTGATCTGAAACAAAACAAGACGACAACCAGAAGGTGCACAGTAATATGCTCATGCTTATAATGGGGAGGGAGGGAGGGTTGCGAGCAGTTTGAGCATACTTACCGAGCAGTAATGCCACGTATATATATGTCCCGTGTCTAATAGGAGAATGGTAGTGATTGGAGCAGTTTGACAGCTGACCGCATCAGCTGGTCGCAGCACTATGCCTACGTGGCCTGACTGAACTAACGCTGCGCTCGATTAGTATACAACTCAGAGTAGTGTTGAGTTAATTTATTATTTTAGACAAAATTAGCGTAACACTTTACAATAAGGTTTCATTTGTTAACATTATTTAACTACAGTAGTGGCCAAAAGTGATGTCTGGAGGGGATATTTGTTTTTAATGATGCTACAAGTTCGATTAAACCATCAAAATATGAGGTAAATATATATATACATATATATATATTTTTAAAATATTTTAAATATGAGGGAAGAACATAACACTAAACTTGGTTAAGGTACTAAACTATTTGGCAAAAAAAGGCAAACTACAGCTACAGGTTTAATTTTTCTATGAAAAAAAATGCATAGAAAAACAAAAAGCTCACAGGAAAAAAGCATACATTGACTACATAATCAGTTACTAATATTTCGTTGGTTCTCTCTTGTTTGTATGACCACCTGGACAAAAATGATTTCCACACAATTTGGCATGTTTCGTTGCATTATTATCACAAATAAAATAATTGACTCCAAGCACAACTACGAAATAGTACATTATATTTATAATATTTGAAAAAAGGGTGAAGATGTCAATTTTCCTATAGGCCGGACATCACTTTTGGCCACTACTGTACATCAGGTAACCATGAACTAACAATGAAAAATACTACATTATTAAAATCAAAAGTTGCATCTGTTAATATTATTTAATGGTATTGACTGAGCTAACATGGACAGTTGCATTTATTAACAAATGGTAACAAATATTAAATACTGTAACAAATGTAATACTCTTAATTAATGCATTAACCAACCTTAACTAATGAAACCTTATTGTAAAGTGTTACCAAATTAGTGTCACGAATGTGGCTCCCTCGGCCCTTCCTCCGGACCGCCGGAGGGAGCCATCACCAGAATACTGATCAGTTCTCATTCGGACTACGTCTCCCATGGGCCCTCATTCCTGGGACTGATTGCACACTCACCTGCACCACATCACACTCACACTATTTAAGACACACTCACACACACACACCGCGAAGTCTTGATTTGCCTTGGTGATCATTTCTGAGCGTTTTCCCGTGGACTGTTACCTGTTATCGTTTGGACTGTTTATTCTCTGTGACCCTTTGCTGCCTGCCCTGATCTTTGCCTGTTTCCTGGACTGTGATTGTTTGCTGCCTGCCCTGATCCTTGCCTGTACACTGACTCTGTTTGTCTGCCACCTGCCTTGACCATTGCCTGTCCCAGTTTATGCCTCTGCCTTTGCCCTGTCTGCTCTGTAAGTTCTCTTAATAAACAGCTGCAAATGGATCCACATTTTGTCGACTCATCATTACAATTAGGCTCTTTTTTTTTATTTATTTTTTTTTATTCAGAGTAGATATATTTATCACCATATTTTTTTATTTAGAGAGCACAGAGACATTTTCCCTGCTTGTGCACAGATGAGAAGCATGAAGCAGATAGTGATTCTGATGACTCTCATAAGTGGTGTGTTCACCGCTCCATTTGTGAAGGGGGAGCAGGCCACGAAATTTTTACGTATAAAGAGACAGTCTGGCTACTGGGATCCCAATTATTCTCAGAACCAATGGGGTTACACCATACAAGAGCAGGTGAACACTAGCGACCTATCCACAGCCTCAGATTTGATACGTTGTGTGAAAAAGGCTTCCACTGTTCAGCTGATTATAATGTTTGTATGTACAGTATAAGTGAAATCGAACCAAAGTACATCTATCACTTGCTTCGTATGTGGAACCTCTAAAAGCTACAGCACTATTTACATCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_06537186_06537567.mRNA True 2095 mRNA 0.39 2 6537104 6539310

Neighbor

gene id symbol gene type direction distance location
CI01000059_06521399_06533677 TAGLN3A, TAGLN3 coding downstream 2548 6521159 ~ 6534556 (-)
CI01000059_06446066_06457895 EIF4E1B coding downstream 79185 6445276 ~ 6457919 (-)
CI01000059_06430220_06439547 CASR coding downstream 97557 6429884 ~ 6439547 (-)
CI01000059_06413479_06420106 B4GALT4 coding downstream 116998 6413479 ~ 6420106 (-)
CI01000059_06368210_06388793 ARHGAP31 coding downstream 147901 6367217 ~ 6389203 (-)
CI01000059_06546191_06552012 ABHD10A coding upstream 6742 6546052 ~ 6552012 (-)
CI01000059_06560307_06561286 GSX1 coding upstream 20474 6559784 ~ 6561450 (-)
CI01000059_06606518_06612481 GTF3A coding upstream 67181 6606491 ~ 6612481 (-)
CI01000059_06621058_06632392 WASF3 coding upstream 80588 6619898 ~ 6632909 (-)
CI01000059_06642665_06650346 RNF167 coding upstream 102999 6642309 ~ 6650998 (-)
G255134 NA non-coding downstream 1508 6535218 ~ 6535596 (-)
G255118 NA non-coding downstream 66231 6470660 ~ 6470873 (-)
G255117 NA non-coding downstream 69660 6467184 ~ 6467444 (-)
G255108 NA non-coding downstream 129114 6407749 ~ 6407990 (-)
G255106 NA non-coding downstream 133141 6403735 ~ 6403963 (-)
G255168 NA non-coding upstream 30561 6569871 ~ 6570111 (-)
G255172 NA non-coding upstream 35121 6574431 ~ 6574642 (-)
G255176 NA non-coding upstream 39780 6579090 ~ 6579547 (-)
G255203 NA non-coding upstream 146585 6685895 ~ 6686151 (-)
G255205 NA non-coding upstream 150401 6689711 ~ 6689945 (-)
G255092 NA other downstream 294312 6236106 ~ 6242792 (-)
G254203 NA other downstream 1298805 5237786 ~ 5238299 (-)
G253914 NA other downstream 1783022 4753538 ~ 4754082 (-)
G253013 NA other downstream 3065195 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 4437437 2094279 ~ 2098985 (-)
G256890 NA other upstream 2442386 8981696 ~ 8982117 (-)
G257014 NA other upstream 2914906 9454216 ~ 9599008 (-)

Expression


Co-expression Network