CI01000059_06546191_06552012 (ABHD10A)


Basic Information

Item Value
gene id CI01000059_06546191_06552012
gene name ABHD10A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 6546052 ~ 6552012 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_06546191_06552012.mRNA
AGAGCGGGGCAGTATGGCGTCAATTGTGCTCAGAAATTGTTCAAAGGTCCTTAAAATAAACGTCCGGCAATTCACCATTCTCCCGCACGTTTCAACGGGTGTTCGACACAAGACCACAATTCAGTATGCTACACGGCCTGATCTACCAAAGCTGGCCTACAGGAAACTGAAAGGGAAGAGTCCTGGAGTGGTTTTCTTGCCTGGTTTTGCCTCACACATGGGTGGACAGAAAGCAGAAGCATTAGAGGAGTTCTGCAAGTCTTTGGGTCACTCATACCTCAGGTTTGACTATTCTGGCTGTGGGTCATCTGAAGGGGAAATGGGTAACTACAACATTGGTGCCTGGAAGAAGGATGTACTCTATGTACTGGATGAACTAGTAGAAGGGCCACAGATCCTGGTGGGCTCCAGCATGGGTGGGTGGCTGATGTTGCTAGCCGCTCTTGCACGTCCAGAGAAGATAGCTGCTTTAGTGGGCATCTCAACCGCTGCAGATCACTTTGTCACAGCCTTCCACGCCCTCCCAATAGAGACAAAGAAGGAGATAGAGGAACAGGGCTTTTGGAAATTCCCTACCAAGCACAATGAAGAGGGTTTCTACACTCTAAGCTTGGACTTCCTGAAGGAGGCGGAGAACCACTGCATACTCCACAGCCCCATCCCTGTTTCCTGCCCCGTTCGTCTGATTCACGGCCTCAAGGACTCTGACGTACCCTGGCACGTCTCCATGCAGGTCGCAGAGCGGGTACTCAGCAATGACGTGGATGTCATTTTTCGCAAACTTGGGCTTCATCGCATGTCAGAGAAAGATGATATTAAGCTCATTGTGTACACGATTGATGACCTTATCGACAAATTGACCACATTAGCGTGAAGAATGAGTGTGAGGACAATGTGAAAGATGGACCAGTTGGGATGGGGAAGGCAGTGTACACAGGTGTCAGGTTTCTGGAAAATGGAGGTAGATGTTATAGTGATGGAAACCAAATGAATTGAAAGGGATGTCAAACAAA

Function

symbol description
abhd10a Predicted to enable hydrolase activity, hydrolyzing O-glycosyl compounds and palmitoyl-(protein) hydrolase activity. Predicted to be involved in protein depalmitoylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Orthologous to human ABHD10 (abhydrolase domain containing 10, depalmitoylase).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K13702 ABHD10; abhydrolase domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_06546191_06552012.mRNA True 1013 mRNA 0.49 5 6546052 6552012

Neighbor

gene id symbol gene type direction distance location
CI01000059_06537186_06537567 NA coding downstream 6742 6537104 ~ 6539310 (-)
CI01000059_06521399_06533677 TAGLN3A, TAGLN3 coding downstream 11496 6521159 ~ 6534556 (-)
CI01000059_06446066_06457895 EIF4E1B coding downstream 88133 6445276 ~ 6457919 (-)
CI01000059_06430220_06439547 CASR coding downstream 106505 6429884 ~ 6439547 (-)
CI01000059_06413479_06420106 B4GALT4 coding downstream 125946 6413479 ~ 6420106 (-)
CI01000059_06560307_06561286 GSX1 coding upstream 7772 6559784 ~ 6561450 (-)
CI01000059_06606518_06612481 GTF3A coding upstream 54479 6606491 ~ 6612481 (-)
CI01000059_06621058_06632392 WASF3 coding upstream 67886 6619898 ~ 6632909 (-)
CI01000059_06642665_06650346 RNF167 coding upstream 90297 6642309 ~ 6650998 (-)
CI01000059_06656629_06660298 SPAG7 coding upstream 104375 6656387 ~ 6660298 (-)
G255134 NA non-coding downstream 10456 6535218 ~ 6535596 (-)
G255118 NA non-coding downstream 75179 6470660 ~ 6470873 (-)
G255117 NA non-coding downstream 78608 6467184 ~ 6467444 (-)
G255108 NA non-coding downstream 138062 6407749 ~ 6407990 (-)
G255106 NA non-coding downstream 142089 6403735 ~ 6403963 (-)
G255168 NA non-coding upstream 17859 6569871 ~ 6570111 (-)
G255172 NA non-coding upstream 22419 6574431 ~ 6574642 (-)
G255176 NA non-coding upstream 27078 6579090 ~ 6579547 (-)
G255203 NA non-coding upstream 133883 6685895 ~ 6686151 (-)
G255205 NA non-coding upstream 137699 6689711 ~ 6689945 (-)
G255092 NA other downstream 303260 6236106 ~ 6242792 (-)
G254203 NA other downstream 1307753 5237786 ~ 5238299 (-)
G253914 NA other downstream 1791970 4753538 ~ 4754082 (-)
G253013 NA other downstream 3074143 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 4446385 2094279 ~ 2098985 (-)
G256890 NA other upstream 2429684 8981696 ~ 8982117 (-)
G257014 NA other upstream 2902204 9454216 ~ 9599008 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location