CI01000059_06621058_06632392 (WASF3)


Basic Information

Item Value
gene id CI01000059_06621058_06632392
gene name WASF3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 6619898 ~ 6632909 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_06621058_06632392.mRNA
ATTCATGATGACTAAAAGAGAATTTTGATAAGGAAAATACATACAATGACCCCTGAAATATTGTCAATGAATTAGATAATGAAAATATTAAAACATGTGGTATTTTTAAAGAAAGAGAGCATAAACACACTTAAAGGTTTTAAAAAAAATAATAGATAACAGTAAAACAAATAATTTTGAATACTTTTTGCATGTGTGTGTGTGTGTGTGAGAGTGTGAGAGAGAGTGTGTGTGTGAATGTGGTTCTGGTAAACCCTAAATAGCAATATCCAAAATTCTTGCCCTTGTAAGGGATATTTTTTGGTCCTCATGAGGAAAACAGCTTATAAATCATACTAAGTGATGTTTTTTGAAAATGTAAAAATGGAAAGTTGCCATAAAACATGGAAACCTGACTCATATTTTAGCCTTCCTTATGATGTGTGATGGAAGGTGTGAGGATATGTGGTCTAACTGACTGTGTTTGTGTACTTACAGGTGCTGAGGTGTGTTGGTGTGTGTGTGTTGAGCTGAAGCCATGCCGCTGGTCAAGAGAAACATCGAGCCGAAGCACCTGTGCAGAGGAGCTTTACCTGAGACCATCAGCAATGAGCTGGAGTGTGTGACCAACAACACTCTCTCTGCCATCATACGCCAACTTAGCAGCCTCAGTAAACATGCTGAGGACGTGTTTGGTGAGCTCTTTAATGAAGCCAATACATTCTACCTGCGTGCGAATTCTCTACAGGACCGCATCGACCGTCTTGCAGTCAAGGTCACTCAGTTGGACTCTAGTGTGGAGGAAGTATCACTTCAGGACATTAACATGCGCAAAGCCTTTAAGAGTTCTACTGTTCAAGACCAGCAGGTGGTGACAAAGAGCAGCATTCCAAACCCCATCACTGAGATGGATGACCATATTGATGGAATTAAATTCTACACAGACCCCTCATATTTCTTCGACTTGTGGAAGGAGAAAATGCTTCAAGACACGGAAGACAAGAGAAAAGAGAAGAGGAAACATAGGGAGCAGAAGCGGTGTGTTGATGGCACGTTGCCTCGTGAGGTGAAGAAGGTTCGTAAGGCTCATAACCGCAGACAGGAATGGAACATGATGGCTTTTGATAAGGAGCTACGGCCGGATCATCGTCATCATCATCATCCACTTCACAGGGTTGTATCGTCTGAGGGCTCGCTGTCTCCAGAGGGCAGACCACATCCAAACAACTCTGACTACCCAGTCCCAGCATGCCATGCTCAAGCACGAGCCAGTCATGCTCAAGCACGAGCCAGTCATGCACATTCACAGCCGCACCCATTCCTGCCTGTGGAGACAGCATCATCTAGTGCCAATGGAGGGGTAGAGCACGAGTACCACAGCATTGGAGGGCCTGTAGGGGTGGCTGTGGGTGCTGATGTAGGTTACAGAGTGGGCTTACTCGCTCGAACACATCCAACTCCTCCACAGTACCTGCCCCGGGAAAATGGAGTCAATGGAACCATCACGCTTCCACCGACAGACTATGGTATGATGGAGTACTATGCCAGTTCAGGTCCGCCCCCTCCTCCAATGGCTCCCCTCATTCCATCTGCACAGACGGCTTTTGCCTCACCTCCAGCTACTCCTCATCCTGGACCAATCACATCAGCCTTACGGTATCCTCTTCCACCTGTCCCACCTCCTGGACCGGTTTTAGCTTCACCTCCCGAAGGTCCACCTCCTCCTCCGGCCCCTCCCATACCACCTCATCCAGCAGCACTTGGAGAGGGACGGAGATACAATCTGCAGCCTGTCACAGACGCTCGCAGTGATCTACTCTCAGCAATACGCATGGGTATCCAACTAAAGAAAGTACAGGAGCAACAGGAACAGCAGGCTAAAAGAGAGCCGGTGGGGAATGACGTGGCCACTATACTCTCTCGCCGCATTGCTGTGGAGTACAGTGACTCAGAAGACGACTCAGAACTTGATGAGAATGAATGGTCTGACTGATTATAGTCAGCCACACACACAATGGTAGAATAGAGACCTTCCTTGTAAATATGAAAGTACGTTCACCTTCAGACACCCACATATAGTTGATTATTAACTCTTTCCCCGCCAATGACTGAATTTTCTGGGCCCTATCATACACCCGGCGCAATGCGACGCCAGGCGCGACGCAAGTGCAATTTGCTAGTTTCAGCCCAACACAGTTATCATTTTCACGTCCAGCACCCACGTTGTTTAAATAGCAAATGCATTTGCGCCCATCTGTTCACCCATGGGCGTGCTGGTCTGAAAACGAGGTGTGTTCAGGCGCATTGTTGGCGTGTTGCTATTTTGAGGCAACTGAAACTGCACCATTGACCAACAAAACCTGGTCTAAAGTCAATGAGAATGTCTGTATTCCGCCATGTAAATAGCAATCCACCATGGTGCAAGCGCATCTGGGTTTTAAAGGGAAAGGGAGAAGACACTCTGATTGGTTTATTGCACATTACGCTTAAAACACACCCATGACTCATTAAGAGACTATTTACAACACTTTTGGACCATGCACCTGGTGCGCCGACCATTTTATCCATTGTTAAACTAGCAAAAGTGGATTCGGACATGCCCTAAGTGCACCTGCCCCATGCACTTCAGACCATGCACTTAGAGCGTTAAAATAGGGCCCTCCGTCGTTTATGACACAACGCTTCTCCGCCAATGGCGGAATTTTCTGGCAATCCATGTTTTCACTGTTATACAGTAGGGGGCGCTATTACACATCTTCTGAAAGAGTATAGAATCTCCGGATCAAAACATAGGCGAAGAAGAAGCCAAAACAAGCGATAGAAGCATTGCTTATGAACATGTAAGCTAACCACGATCATCAAACTTTCAATAGTATAAATGAAAACTGCCTAACGTTACCGAATGAAATGTTGACCCAGGACGAGGTAAAGGACTGTGAAGCTTTGGGGGTGTTGATGGACTCAGTCTACTCCATCTATGTTTTAATCATCGTTCTGAATCCGAGCCGGATGTAGTCTTTGGCAAAAACGTGATTTTCTCAGCTTTTTGTTCAAAATGTTGCTTTTTTTAAAAAACACTGTCGGGGAAAGAGTTAAGAATGATGTTAATTTCTCAAAGAATGTTATGCAATATAGAGGGAAGTTTTGAATAAA

Function

symbol description
wasf3 Predicted to enable Arp2/3 complex binding activity and protein kinase A regulatory subunit binding activity. Involved in cytoskeleton organization and regulation of cell shape. Located in extracellular exosome.

GO: NA

KEGG:

id description
K06083 WASF3; WAS protein family, member 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_06621058_06632392.mRNA True 3132 mRNA 0.45 8 6619898 6632909

Neighbor

gene id symbol gene type direction distance location
CI01000059_06606518_06612481 GTF3A coding downstream 7417 6606491 ~ 6612481 (-)
CI01000059_06560307_06561286 GSX1 coding downstream 58448 6559784 ~ 6561450 (-)
CI01000059_06546191_06552012 ABHD10A coding downstream 67886 6546052 ~ 6552012 (-)
CI01000059_06537186_06537567 NA coding downstream 80588 6537104 ~ 6539310 (-)
CI01000059_06521399_06533677 TAGLN3A, TAGLN3 coding downstream 85342 6521159 ~ 6534556 (-)
CI01000059_06642665_06650346 RNF167 coding upstream 9400 6642309 ~ 6650998 (-)
CI01000059_06656629_06660298 SPAG7 coding upstream 23478 6656387 ~ 6660298 (-)
CI01000059_06668658_06675615 SLC25A11 coding upstream 34011 6666920 ~ 6675615 (-)
CI01000059_06743553_06768560 KIF1C coding upstream 110352 6743261 ~ 6768560 (-)
CI01000059_06817935_06848280 NA coding upstream 184981 6817890 ~ 6848280 (-)
G255176 NA non-coding downstream 40351 6579090 ~ 6579547 (-)
G255172 NA non-coding downstream 45256 6574431 ~ 6574642 (-)
G255168 NA non-coding downstream 49787 6569871 ~ 6570111 (-)
G255134 NA non-coding downstream 84302 6535218 ~ 6535596 (-)
G255118 NA non-coding downstream 149025 6470660 ~ 6470873 (-)
G255203 NA non-coding upstream 52986 6685895 ~ 6686151 (-)
G255205 NA non-coding upstream 56802 6689711 ~ 6689945 (-)
G255209 NA non-coding upstream 63141 6696050 ~ 6696343 (-)
G255158 NA non-coding upstream 164861 6797770 ~ 6801605 (-)
G255238 NA non-coding upstream 177893 6810802 ~ 6811025 (-)
G255092 NA other downstream 377106 6236106 ~ 6242792 (-)
G254203 NA other downstream 1381599 5237786 ~ 5238299 (-)
G253914 NA other downstream 1865816 4753538 ~ 4754082 (-)
G253013 NA other downstream 3147989 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 4520231 2094279 ~ 2098985 (-)
G256890 NA other upstream 2348787 8981696 ~ 8982117 (-)
G257014 NA other upstream 2821307 9454216 ~ 9599008 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031646 wasf3a coding NC_007116.7 CM002889.2 68007172 ~ 68022631 (-)