CI01000059_06817935_06848280


Basic Information

Item Value
gene id CI01000059_06817935_06848280
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 6817890 ~ 6848280 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_06817935_06848280.mRNA
AGGCCCATGAAGGTAGCGTGAGCTGTGAGGATGAGCTCTGCAGATTTGCGGGGAACAGAGAGCTGAAGGGAGGATCCAGACTCCAGGAAGTGAATTCCTATGACAGAAACACATACTTCATAATCAGGCACAGAGTAAATATTTTGCAAATATTTCAAGATTTTTGTATGATGGTAACAGATGGAATTGCAAAGCAAGGTGACTCCACACTTCTGAATAACATCTACACAGATCTCTATATCACACAGGGTGGCAGTGAACGGGTCAATACGGAACATGAGGTAAGACAGATTGAAGTTGCTTCCAGACGTCATCAATCACAAGAGATACCAATTGAATGCACCAAGATGTTTGAAGCACCTGAACAAGACAAAGAGATCAGAACTGTACTGACAAAAGGAGTTGCTGGCATTGGAAAAACCATCTCTGTGCAAAAATTTGTTCTGGATTGGGCAGAAGGAAAAGAAAATCAAGATATCAGTTTCATATTTCCTCTTCCATTCAGAGAGATGAACTTAAAGGAGATAGAAAAATCAAGTTTGATGGATCTTATAACTCAGTTTTTCCCAGAGACAAAAGGACTGAACCTTACAAGAAGGAAAAATTTCAAAGTCCTGTTCATCCTTGATGGATTGGATGAATGTCGTCTTCCTCTGAAGTTTGATGGTAATGAGACGTGGCGTGATGTATCGTCACCAGCGTCACTGGATGTTATCCTAACGAACCTCATGAAGGGAAATCTGCTTCCTTCTGCTCTCATCTGGATCACCACCAGACCAGCAGCTGCCAGTAAGATTCCTCCTGACTGTATCGACCGGGTGACTGAGATACGAGGATTCAATGATGCACAAAAGGAGGAATACTTCAGAAAAAGATTCACTGATGAGAAAATGACCAACGTAATCTTTGATCATGTTAAAAAGTCCAAGAGCCTCTTTATCATGTGCCACATCCCAGTCTTTTGCTGGATTTCAGCCACTGTTCTCCAGAACATTTTGGAGGAGAAAATAAATAATGATCTGAAAAATAGTCATGCTGATGAAACCTCTATAACACTGCAGGAATCAAATACTGAAGACACTCCCAAGACTCTGACACAAATGTACGCACACTTTCTCCGCTTTCAGATCCAGCAGAGCCGCCGAAAGTATGATGGAGAATACAGACCAGATGTTTCCTTGGATAAAGACACCATCCTTTCACTGGGGAAACTGGCATTTCAACAGCTTGAAAGAAGCAATGTGATCTTCTATGAATCAGACCTGGAAGCCTGTGGTATTGACGTCTATAAGGCATCAGTGTGTTCAGGCATGTGTACCCAGATTTTTAAGGAGGAAACAGGGATCACACTTGGTACCATGTACTGTTTTGTTCACTTGAGCATTCAAGAGTTTATTGCAGCCCTTTATGCACATCTGTTTTTAGACATCAACAAGAAAAGTGTGTTTGTTCAGGAGTCTACAGAACAGGAATACAAAAATGAAACCATGATTGATGTGCTCAAGACTGCAGTGGACAAGGCTCTCAAAAGTGACAATGGACATCTAGATCTTTTCCTTCGCTTCTTCCTCAGTCTTTCACTCCAGTCCAATCGGCGACTCTTACAAGGTCTGTTGACACAGCAAGATGGCTATGACCAGAGCAAAAAGGAAATAGTTCAGTACATCAAACAGAAATTAGAAGGTAATCTGTCTCCAGAGAGATCCATCAATCTGTTCTACTGTCTGAATGAACTGAATGATCAAACTCTGGTGAAAGAGATTCAGACTCAGCTTAGAGAAGGAAGTCTCTCATTTGCTGACCTTTCACCAGCCCAGTGGTCTGCTTTGGTCTTTGTGTTGTTGACATCAGAGAAAGAGCTAGAGGAGTTTGAGCTTCAGAAATTCAAGAAATCAGACGAGTGTCTCATTAGATTACTGGCAGTCATCAAAACCTCCAAAAGAGCTCTGCTAAATGATTCTAACCTAACAGACAGAAGTTGTTCAGCTCTGGCTACAATTCTTGGATCAGATACAGAGTTGATAGAGCTGAACATGAACAATAATAATCTACAGGATTCAGGACTGAAGCTGCTCTGCACTGGACTGAAGAATATAAAGTGTAAATTGGAGAGACTGAAACTTTCAGACTGCAGTATCACAGAAGAAGGATACAAAGCTTTGGCTTCAGCTCTGAGATCAAACCCTTCACACCTGATAGAGCTTGATCTCACAGGAAATGATCCTGGACAATCAGGAGTGAAGGAGCTAACTGATTTACTACAGGATGGACGCTGTACTTACATCAGGTTTTTGAAAAGTCCTGCTGCAGAGGAAGTGTGTGAGTATCTCACTGAAGTTCTGGGTAAAAGTCCATTATTACTGACAGAACTGGATCTGAGTGAAGATAAATTAGGAGATCTGGATGGAGAGAAGCTCTCTGCTCTTTTGATGGACTCTCATAGCAAACTGGAGACAATCAAGCTGAATAATTGTGTGCTGACAGAGAAAAGCTGTTCAGTTCTAGCTACTGTTCTCTCCTCCAAAACGATACTGAAAGAGCTGAACCTGAACAACAGCCGTCTGCTCGATTCAGGTGTCAAACAGATCTCTGAGGGACTAAAGAATCCTGTGTGTGAGCTGAAGATACTCAAACTTTCAGACTGCAGTATCACAGAAGAAGGATATAAAGCTCTGGCTTCAGCTCTGAGATCAAACCCTTCACACCTGATAGAGCTGGATCTCACAGGAAATGATCCTGGACAATCAGGAGTGAAGGAGCTCACTGATTTACTACAAGATCCAAACTGTCAACTGAAGACCATCAGGTTTCTGAAAAGTCCTGCTGCAGAGGAAGTGTGTGAGTATCTCACTGAAGTTCTGGGTAAAAGTCCATTATTACTGACAGAACTGGATCTGAGTGAAGATAAATTAGGAGCTCTGGATGGAGAGAAGCTCTCTGCTCTTTTGATGGACTCTCATTGCAAACTGGAGACAATCAAGCTAAATAATTGTGAGCTGACAGAGAAAAGCTGTTCAGTTCTAGCTACTGTTCTCTCCTCCAAAACCATTCTAAAAGAGCTGAACCTGAACAACAGCCGTCTGCTGAACTTAGGAGTCAAACAGATCTGTGAGGGATTGAAGAATCCTGTGTGTGAGCTGAAGATACTCAAACTTTCAGACTGCAGTATCACAGAAGAAGGATATAAAGCTCTGGCTTCAGCTCTGAGATCAAACCCTTCACACCTGATAGAGCTGGATCTCACAGGAAATTATCCTGGACAATCAGGAGTGAAGGAGCTCAGTGATTTACTACAGGATCAGAACTGTCAACTAAAACTGAGGTTTTTGAGTCCTGCTGCAGATGAAGCCTGTCAGTATGTGAGAGGAATTGTGGGTGAAAACCCATTACTAGTCAAAAACCTGGATCTGAGTAAACATAAACTAGGGGAGACACGAGTGAATCAGATCGCTGCTCTACTGCAGGATAAACACTGTCAACTCAACAAACTCCAGCTGCGTGATTGTGGTCTAACAGAGGAAAGCTGTTCAGCTCTCGCTACAGTCCTGAGATCAAACTCAAGACTAGAAGTGCTTGACATCAGCAACAATAATCTGCAGGATTCAGGAGTGAAGAAACTCCAGAAAGCATTAGAAAAAACAAACTGCACACTGAAGAAACTTGGACTTTCAGACTGCAGTATCACAGAAGAAGGATATAAAGCTCTGGCTTCAGCACTGAGATCAAACCCTTCACACCTGATAGAGCTGGATCTCACAGGAAATGATCCTGGACAATCAGGAGTGAAGGAGCTCACTGATTTACTACAGGATCCAAACTGTCAACTAAAACTGAGGTTTTTGAGTCCTGCTGCAGATGAAGCCTGTGAGTATGTGAGAGGAATTGTGGGTAAAAACCCATTACTCCTGAGAGAGCTGAATCTGAGTGAACGTGAACTAGGAGACACAGGAGTGAATCAGATCGCTGCTCTACTGAAGGATAAACACTGTAAACTCAACACACTGATTCTGTGTAGATGCAGTATTAAAGAGAAACAGTGTTTCATCCTGACTTCATCTCTGAAATCAAACCCATCACACCTGAGAGAGCTGAACCTGAGTGGAAATAAACTAGGAGACTCTGGAGGGAAGCACTTATGTGACGTATTGAAGGATTCACACTGTAAACTGGAGAGATTGAGGTTAACATGCTGTGAAATGACAAATGAAGGTTGTTCTGCTGTGACTTCAGCTCTAAAATCACACCTGAGAGAGCTGGACCTTAGTGGAAATAAACTAGGAGACTCTGGAGTGAACAACCTCAGTGTTCTACTGATCAACACACAATGCAAGCTGGAGAAACTACAGTTAGTATCATCATACTGTACAGCAGTCACGTCTTTCTGTTTCCCTGGCTGCTGGATTGTGCTCATCTTCCCGCTTCTTCCGGCTTCCCCGCTCCACCTGCCATCTTTGCCCATTGCTCCCCCTGTCTCGTTTGCCATCATCCTTGACCTCCTGAGCTGCAGACTGTTCTTGGTTGGGCATTTAAGTTCCATGGACTGTGTCTTGCTACCGGCTGTCATTGACTGTGGACATTATCCAGTCTAGCCCTTGCTGCAATTTTGTTACTCCTTGATCTGTTTCCCTAATAAA

Function

NR:

description
Zgc:174180 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_06817935_06848280.mRNA True 4634 mRNA 0.43 17 6817890 6848280

Neighbor

gene id symbol gene type direction distance location
CI01000059_06743553_06768560 KIF1C coding downstream 49330 6743261 ~ 6768560 (-)
CI01000059_06668658_06675615 SLC25A11 coding downstream 142275 6666920 ~ 6675615 (-)
CI01000059_06656629_06660298 SPAG7 coding downstream 157592 6656387 ~ 6660298 (-)
CI01000059_06642665_06650346 RNF167 coding downstream 166892 6642309 ~ 6650998 (-)
CI01000059_06621058_06632392 WASF3 coding downstream 184981 6619898 ~ 6632909 (-)
CI01000059_06914640_06936857 NA coding upstream 65582 6913862 ~ 6936857 (-)
CI01000059_07002729_07060398 DLG4 coding upstream 154397 7002677 ~ 7060398 (-)
CI01000059_07144283_07150061 NA coding upstream 295566 7143846 ~ 7152701 (-)
CI01000059_07156085_07160233 NA coding upstream 307436 7155716 ~ 7160233 (-)
CI01000059_07212957_07217869 SLC25A45 coding upstream 364677 7212957 ~ 7217869 (-)
G255238 NA non-coding downstream 6865 6810802 ~ 6811025 (-)
G255158 NA non-coding downstream 16285 6797770 ~ 6801605 (-)
G255209 NA non-coding downstream 121547 6696050 ~ 6696343 (-)
G255205 NA non-coding downstream 127945 6689711 ~ 6689945 (-)
G255203 NA non-coding downstream 131739 6685895 ~ 6686151 (-)
G255719 NA non-coding upstream 53210 6901490 ~ 6903467 (-)
G255691 NA non-coding upstream 83858 6932138 ~ 7046601 (-)
G255735 NA non-coding upstream 319226 7167506 ~ 7168853 (-)
G255740 NA non-coding upstream 383508 7231788 ~ 7231999 (-)
G255742 NA non-coding upstream 385835 7234115 ~ 7234338 (-)
G255092 NA other downstream 575098 6236106 ~ 6242792 (-)
G254203 NA other downstream 1579591 5237786 ~ 5238299 (-)
G253914 NA other downstream 2063808 4753538 ~ 4754082 (-)
G253013 NA other downstream 3345981 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 4718223 2094279 ~ 2098985 (-)
G256890 NA other upstream 2133416 8981696 ~ 8982117 (-)
G257014 NA other upstream 2605936 9454216 ~ 9599008 (-)

Expression


Co-expression Network