CI01000059_07144283_07150061


Basic Information

Item Value
gene id CI01000059_07144283_07150061
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7143846 ~ 7152701 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_07144283_07150061.mRNA
ACAGTGAGGTTCTGCAGCTCATTAGTAAGTTCAGTCGAGTAGTTTAGCGGCACACTTAGGGTTTTTTTAAAAACTATCATTGTGATCAGTACTTCCACACAGCTTTGCAAAAATTCTGAAATAGTGTTCGTTCGTATATAAGCTTTATTTTTTAAAGGGGTGTGTCCTCTGAATGTATTATTTTGATTGTGAACCTGACGTCAGCGGACAGCTGTGCGTTAAAGCACTGGTGCTCTCAGTGCGGGATGTGCAAGGACAGCTGTCGCTACACTGACCAAGCTGTTGTGGGTTTTTTTTTTCGTCCGCTGGAGAGGGAGGCAGGCAGGCAGGCATTGGGCTGTGTACCTTTAAGAGAGGGCGGAGTGAGTTAGAGCCCCGGGGCTGTGTGTTGAACACACTACTGATCCTGTTTAGGTATCTTTTCCTTTTTTCTCTTCTGTTTTCTTCGTGCTGATTTTACTGTGCTATGTATTATTCATAAATGACGCTTGGAGGCGGGGTTTATACAAAGTATCAGTAATAACAGCAGTGTCGAGGAGGCGGACTCGCTGACACTGAAGGTGGGTGGACGTTTTGCCAACGTTGACCTAAACATTTACTTTCTTTCTCTTGACAGATGTTGTCAGGACCTGACATCAGTTTAACAGTTGTTTCGTCAGGTAATGTTAAGCTCTTTGCGTATTTTTTTTTTTTGCAAACCTCATTTTCTCTCTTCAGTTTAATTAGTCTTCGGTTTTTATAATGTTAAGTTGTTGAGATAACTTTTTGCAAAAATCCTAAAATGAATTTTTGTAGGATATTTACTTTTATAATATAACACAGCCCGTTCTTAGGGTACTGTTGTAGATTTGGTCATGTTTATCATAACTTTACGTGTTGAAATAACGTCTTGCTAAAGGATATTTAAAGGAAATTGCAAGTTATAGGAGTTTTAAAATCCTGAAAAACATATTTTATCTTATTGGGAATCATAATCAGAAACTCTTAAAAGATTTTTGTTTTAAGTTCTGTTGGAATTCTGAAAGACAATATCATGAGGATTAGTGGTTTTATTTATTTATTTGATATTTTGATATATTTAAAGAATAGATCGTTTTAGTCACCTGATATATAAGTACATTACATGATAGCAAAATTGCTAAATTTGTTATTTGCCTAAAATTAACAAACCGTACTAAAATAGATTGGACCTGAAACTAGACAGACTCGTTTTAGTTAATCTGCCAATTGCATAAAATAACCAAATACTGGACTTTGCGTTATCTGACTGATATTAGGGACTGAATTGTGATCCTGTTTCTCAAAACCAGTCATAAGTCACACAGGTATATTTGTAGCAGTAGCCAACAATACATTGTATGGGTCAAAATTATAATTATTTTTCTTTTGTGCCAAAAATCATTAGGATATTAAGTAAAAATCATGATATTTTGTAAATTTCCTACTGTAAATATATCAAAAATGTATTTTTTGTGAGTGGATACGCATTGCTAAAGACTTCATTTGGACAACTTTAAAGGTGATTTTCTCAATATTTTGATTGTTTTGCAACCTCAAAGTCCAGATTGTCAAATAGTTGTATCTTGACCAAATATTGTCCTATCCTAACAAACCATATATCAGTGGAAAGCTTATTTATTCAGATGATGTATAAATCTCATTTTCAAAAAATTTACCCTTATGACTGGTTTTTGTGTTCCAGGGGCACAATTATTAGTCTGTCACTAGGGGTGTAACCTACACAAAACTGTTTTGAAGTCACAGTTCGGTACAGCAGGGGGAGAAAACTAAACAAAATTGCTTTTTTTAAAAAACAAATTAGACAGTTGTTTAGTGAACTAATTGTGTCGGTGTCTTTAAATTAATTCAATTATAATTAAAAGTTTCTTAAGGATAAAAAAAAAGATCTCTGTTAATGCTGTAAACTACATAGGGAGCCCTTACTTGCACATTACTATAATATTAAAGGTTCAGAGCCCCTGAATTCAGTTGCTTTTTATTTTTATATATAATAATAAACACTCAAATAACAAATTGTATGCAAACTTGTAAACTGCACGTAAGTTATCTTCTAAATCCAATATTAAAATTATGTTTTTTACTCCAATTTGTTGTTGAAATATAATCATTTACACAGTGGCATGACAGATTTATTTAAACATACATTAGATAATCAAGACATCACTAAACAGTTAAGTAAAATATAATGAATATTTAGGCTAATATAGTGCATGTATTTAGCGAAAGAGTTAATTTCTCTGACGAGCTAACAAGTTGTGGAGTCGCCTGAGGTAAATGCTACATGACACGGTGTTTACAAGCTGTTTTATTGACATCTTTCCGCCGTTGAAACATGGATTGAGCGATTACACAAGATATTATACGTTTCAGTAAGTTGTACTCTATCTTTCAACATACCTTCAGATGTTCATTCTTGTTTATTCTGTAGCTAGTATTAAAGAGGAAGAGATGATCGTGTTCACTCGCGCGCTGCGCTGTCGCTTGAAATGAGGCGCCTGTACTTTGATCTCATATTAAAGATCGTCAATTGATTAATGATTTTGTGAATTCAAGGATTTGTGGATGATCGCGTTGTGCTTTCATTTCAGATCCATGTCTCCTCCAGTGTCAGCCTGAAAAATGATAGAGATGTCATTTGACAAAGGAACTGTTTTATCTTGTGAGGGGCTAACAGACCCCACTTCCCAACAGCACTCAGAACTTACTAGAAATGATACCAGCACTCACCATCCATCCGGGAAGACCACAGTTATAAACCTCAGCAAAGAGGGTGGTGAAGAAGCAGGAAATGAGACATCAGTGGAGCACAGAGAGAAAACCGCTGCCACAGATAACAATGCTGTGAGTGACAGTGGGGTTGTTGGGTTCGAATCGTCTACACAAACCCAAAATGGCACCCAGCAGCCCAAACCTCAACAGCAGAAAGTCAATAAGCGCCGCAACACTATGAGCATTGGATTTAAACACCCTTGTTATGGCAAACGACGACGACGTGCCAACTCAGAGAGCGAGTCAGTCCTGCCAACCAATTTCCTGCTGGGCGGGAACATTTTTGACCCACTCAACCTTAACAGCCTTCTGGATGAAGAGGTGAACCGGGCTCTCAACGCAGAGACGCCCAAGTCCTCGCCATTGCCAGCCAAAAACAGAGACCCTGTAGAGATCCTGATACCCAGAGATATCACAGACCCCCTCAATCTCAATTGCCCTAGTGCAGGAGATAGCAGTCTGTTGGCGTCTCCCTTAAAAAGCAGCGGAGGCAGGCGGAGACATCGGAACAAGCACCATGGAGCAAGCGCTGGAGGAGGTGGAAAAGGTTTTGTTGAAGGAGTCACACAGATCGATTTACTCGAGTGTGCAACAGTACAAGATGATATCTCCTTGATACATTCGGACTCAGGGGTTCAACAAAGGTGTTCAAGGGTGGTTCCTGAGGACCAAATATTATCGGATGTGACTCTTGAGGCTCGGTGTTCAGATAAGCCCAGTTTAACCACAAATGGCGGAGAAGTGAAGGAGAAAGCCATTGATGCCTCAACTGCACCTCCATCTACAAACCCCACCAATGCTCCATCAAACAGGCAGCGCAAACGCAGGCGTGCCGGTGGCAGATTTGAGAACACAGACAGTTCAAATAAGGTGGAAAGTTGGGGTCAGAAATCTGGGAGGCATTCTCAGCCCTTTCAAACCCCAGGAATGGGCTCTCGTACTGGAGATGCAGAGAGACCGCATTGGAGGCCACAGTGCAACAACAACCAGCACCCACAACAGCCGAAGAAGAAGTTTCAGTACGGCAACTATAATAAATACTATGGTTATCGGAACCCAGGGCTGAGCGAGGATCCTCGTATGCGTGTTTTGAATCCCGAGTGGTTCAGAGGGAAGGCCGTGTTGGATCTGGGCTGCAACACCGGCCACCTGACGCTGTCCATCGCCAAAAATTGGCGACCGGCACGGATTGTCGGCCTGGATATTGATGCAGCATTGATACATGCTGCTCGGCAGAATATACGGCACTATCTCTCTGAGGTCCACACGCAGCAGGCTCGACGTTCTGGGGAAAATGGGGAGGGCGATCGAGGGGAGAGGATGGAGGAGGATTTAATAGAAGAAAAGAGTCAGCAGAAGGAGAAAGACGAAGAGAGTTTTGTTGTGAAAGAGGACGGAGGGGAGAAAAAAACAAAGCATGTGGAAGAAGTGAACAAATGCACGGTCGGGGAAGTTGGTCGAGAAGAGAAAGCGGCTGATCAGCGAGGAATGAGTGGGAAAATGGAAGATGGAGCGTCGGTAAGTCTCCCTGATGGGAAGCATTCTTTCCCTGTCTCACTCCGGATCTCAAGAGGACCCATAGCTGGCCCCCCTTTGCCTGAGATGAACACAAACAGTCTCCCTCCTGGAGATTTCCCTGCCAACGTGACCTTTGTCAAGGGAAACTATGTGCTGGAAAGTGATATGCTGGTGCAGATACAAAAGGAAGAGTATGACGTGATCCTATGTTTGAGTGTGACAAAATGGGTCCACTTGAACTGGGGTGATGCTGGACTCAAGCGGCTCTTCCACAGGGTCTACAAGCACCTGCGGCCAGGAGGACTCTTCATTTTGGAGCCCCAACCCTGGAGCTCCTACAGCAAGAGAAAGAAGCTCACTGAGGACATCTGTAAGAATTACCATAGCATCCGGTTAAAACCGGACCAGTTCTCCAACTACCTGACTACTGATGTGGGCTTCTCCAGCTACGAGCTCATCGGAACTCCACAAAATTACTCTAGAGGCTTTCAGAGACCAATCTACCTTTTTCACAAAGGACCCTCGCCTCAGAAGTGACACCACCAGTTTGACTTTGAAATCCACAAATTTGAAGATTTTGGAAACAACCAGCATTTGAAGTCACTGGAACTTTAAGCATTTTCTTTCAAATTGAGATGAGACATTCAGTATTGTGAAATGGAATCTCATTGGTGCTGTAAGACAAAATTTTCCCCTGCCATTGAAAACAAAGGAAAATCTCACAATTTTGTTTTTTCAAGGACTCTACTGTAGAATTTTAGCCACAGATCAAAGTTTTTCCCTATTCAAACAAGATGATCTCTCATAAAGGACGGTCTCCTAAAGAAGCACAAAGTTCAATTCGATTCAGTCAAATCCCAAGTAATTCTTGTTAAACACCATTTGTTTTTCGTTTGAAATGAAATTCCCAAAAGTGTAAATTCTTGAGCAACTCTGCCCTTCACACAACTGGTAAAAGATCATCTAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_07144283_07150061.mRNA True 5282 mRNA 0.41 4 7143846 7152701

Neighbor

gene id symbol gene type direction distance location
CI01000059_07002729_07060398 DLG4 coding downstream 83448 7002677 ~ 7060398 (-)
CI01000059_06914640_06936857 NA coding downstream 206989 6913862 ~ 6936857 (-)
CI01000059_06817935_06848280 NA coding downstream 295566 6817890 ~ 6848280 (-)
CI01000059_06743553_06768560 KIF1C coding downstream 375286 6743261 ~ 6768560 (-)
CI01000059_06668658_06675615 SLC25A11 coding downstream 468231 6666920 ~ 6675615 (-)
CI01000059_07156085_07160233 NA coding upstream 3015 7155716 ~ 7160233 (-)
CI01000059_07212957_07217869 SLC25A45 coding upstream 60256 7212957 ~ 7217869 (-)
CI01000059_07222636_07225677 NA coding upstream 69752 7222453 ~ 7225677 (-)
CI01000059_07226610_07230853 NA coding upstream 73909 7226610 ~ 7230853 (-)
CI01000059_07379550_07383609 NA coding upstream 226225 7378926 ~ 7383674 (-)
G255691 NA non-coding downstream 97245 6932138 ~ 7046601 (-)
G255719 NA non-coding downstream 240379 6901490 ~ 6903467 (-)
G255238 NA non-coding downstream 332821 6810802 ~ 6811025 (-)
G255158 NA non-coding downstream 342241 6797770 ~ 6801605 (-)
G255209 NA non-coding downstream 447503 6696050 ~ 6696343 (-)
G255735 NA non-coding upstream 14805 7167506 ~ 7168853 (-)
G255740 NA non-coding upstream 79087 7231788 ~ 7231999 (-)
G255742 NA non-coding upstream 81414 7234115 ~ 7234338 (-)
G255697 NA non-coding upstream 121721 7274422 ~ 7327314 (-)
G255681 NA non-coding upstream 168818 7321519 ~ 7325568 (-)
G255092 NA other downstream 901054 6236106 ~ 6242792 (-)
G254203 NA other downstream 1905547 5237786 ~ 5238299 (-)
G253914 NA other downstream 2389764 4753538 ~ 4754082 (-)
G253013 NA other downstream 3671937 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 5044179 2094279 ~ 2098985 (-)
G256890 NA other upstream 1828995 8981696 ~ 8982117 (-)
G257014 NA other upstream 2301515 9454216 ~ 9599008 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031657 mepce coding NC_007116.7 CM002889.2 68765883 ~ 68782641 (-)