CI01000059_07156085_07160233


Basic Information

Item Value
gene id CI01000059_07156085_07160233
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7155716 ~ 7160233 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_07156085_07160233.mRNA
TGAATGCTGGCGAAATGTCGACCAAGTTCAACATGTGACGGTTAAGATTTATCCTGACCTGACATATAAGATTTATATTCACTCAGTCACATGGGATATTTTTTTCAAACCTTTCCTTCGCGTTTACTTGTCCTACATTACACAGACGACGCGTGCTCGCACATGCTCGAAAGCGTGGCTAATTCACACCTCTATGCAACATGCGCTCAAGTGCCGAAAGTTTCCACGTGCCCATTTGCTCTGTTATGGTCCAGCAGAACAGGAATATACTATTGCCGGTTTATTTCATACTCTTCAACCGATCATGGTTACTCCAAAAATGGCAAGTCGACGACCAGCCAAAAGAATCTTGAAACCGGTTATAGAGAAGAAACGGAGAGACCGGATTAACCAGCGTTTAGACGAGCTGCGAACGCTTCTCCTGGATAACACTCTAGACTCGCGACTTCAAAACCCCAAACTGGAGAAGGCTGAAATTCTGGAATTAACCGTTGAATACATCAGGACAAAAGCGACGGCTGCGAGAGATAGTCAAGGCGATTCTAACAAAGACTCAGATCCACATGATGCTCCGACTCAGCTCTCGAGGAGACACCATGTGCATTTTGCTTCAGTCCCCGAGCCCATCAATGCCCAGACACAGATGCCTTCTAATCCAATCTACAAAGCTGGCTTTAAGGAGTGCATCTCCCGCCTGGCAAGCTTCATTGACTGTGTGGAGCCTTCTCAGCGAGACAGCTTTGTTCAAGGCCTGTGTCACCACCTTGACTCCTACAGCAACACTCTCCCCCAAAGCAGAGTTTCCAGCCAGCATCATCCATGGATCCCCAATGCAGAGTTGACATGCAGGTCGGACATCCCCATGAGAGCCAACACAGAGTCCTTTTCCTACACCAATAGTTTGTATCCCACATCTTTTATGCTCCACCACCCTCATCCCACAGGACAGCCCATGACACATCCCTACCTTTCCCCTCCATACTCTCTCTCTCCTCCACCCTCTCCTTGTTACTCAAGCAGCTCTCCTCCCTTCTCCAGCTCTCCCACATACCTCTCTGTACCCTGCCATTTCCCTTTCCCTCCCACCATCTCGCCGCTCTCCAGTGACTCTTCTTCGTCCTCCTCGTCAATATCATCCTCTCTCAGTCTCCCAACCCCTGCAGTGCCTGTAGTCCCAGGACCTCATCTTCAGGTCTCCGTGGGATCCCCCACTCCAGTGCGACCCACTGGCTCAGTTTCCTCCTGCCAACCCCGGACTCTGAGACGAGCTCTCTTCCACAACCAGCCACAGTCTGTGTGGAGGCCCTGGTGAGCAAAACTCAAAAACACTTAAAGCTCATCAGTTAAACACAGAGCTTCCCATCAGAGTTCCCTTAAGACGCTGAGGAGGCTGGGCTTCACACGGAAAAGACTTGTTGTTATCATCAGGAAGCGAGTGTCCTATGCACAGGTAGAAGTGAAGGTGAGCGAGAAACATTAGGAGCTCTGTGATAATCTCTGTGTGATGACTCGGCTGCTATCAATGTTCATGTTCGTGTGTTCTGTGCTTCCCATTCCCACTGTCACATTCCTTCTTTGTTCTGCATCTGAAATTCTTTATTGTATACAAATTGTGTAAATATATTTATTTTGTCCCTATTGTACATTGTATAAGTTAATTGTACTTTTTTCACTTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_07156085_07160233.mRNA True 1681 mRNA 0.48 5 7155716 7160233

Neighbor

gene id symbol gene type direction distance location
CI01000059_07144283_07150061 NA coding downstream 3015 7143846 ~ 7152701 (-)
CI01000059_07002729_07060398 DLG4 coding downstream 95318 7002677 ~ 7060398 (-)
CI01000059_06914640_06936857 NA coding downstream 218859 6913862 ~ 6936857 (-)
CI01000059_06817935_06848280 NA coding downstream 307436 6817890 ~ 6848280 (-)
CI01000059_06743553_06768560 KIF1C coding downstream 387156 6743261 ~ 6768560 (-)
CI01000059_07212957_07217869 SLC25A45 coding upstream 52724 7212957 ~ 7217869 (-)
CI01000059_07222636_07225677 NA coding upstream 62220 7222453 ~ 7225677 (-)
CI01000059_07226610_07230853 NA coding upstream 66377 7226610 ~ 7230853 (-)
CI01000059_07379550_07383609 NA coding upstream 218693 7378926 ~ 7383674 (-)
CI01000059_07399949_07406822 USP39 coding upstream 239697 7399930 ~ 7406992 (-)
G255691 NA non-coding downstream 109115 6932138 ~ 7046601 (-)
G255719 NA non-coding downstream 252249 6901490 ~ 6903467 (-)
G255238 NA non-coding downstream 344691 6810802 ~ 6811025 (-)
G255158 NA non-coding downstream 354111 6797770 ~ 6801605 (-)
G255209 NA non-coding downstream 459373 6696050 ~ 6696343 (-)
G255735 NA non-coding upstream 7273 7167506 ~ 7168853 (-)
G255740 NA non-coding upstream 71555 7231788 ~ 7231999 (-)
G255742 NA non-coding upstream 73882 7234115 ~ 7234338 (-)
G255697 NA non-coding upstream 114189 7274422 ~ 7327314 (-)
G255681 NA non-coding upstream 161286 7321519 ~ 7325568 (-)
G255092 NA other downstream 912924 6236106 ~ 6242792 (-)
G254203 NA other downstream 1917417 5237786 ~ 5238299 (-)
G253914 NA other downstream 2401634 4753538 ~ 4754082 (-)
G253013 NA other downstream 3683807 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 5056049 2094279 ~ 2098985 (-)
G256890 NA other upstream 1821463 8981696 ~ 8982117 (-)
G257014 NA other upstream 2293983 9454216 ~ 9599008 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031658 her1 coding NC_007116.7 CM002889.2 68788658 ~ 68795063 (-)