CI01000059_07212957_07217869 (SLC25A45)


Basic Information

Item Value
gene id CI01000059_07212957_07217869
gene name SLC25A45
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7212957 ~ 7217869 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_07212957_07217869.mRNA
ATTTAGAGGCAGAGACAGAAGATGAACTCAACATATTGATGATGGATGAAACACTGACAGCACTTACAACACTTATAATGACAGTCATTAGATGGCAGGTCCATGGATTTTTTAAGGGCATGTCATTTCCTGTCCTCTCTGTTGCCCTTAGCAACGCGGTGGTCTTTGGTTCCTACAGTAATGCCCTGGATTACCTTGACCCGTCTCACCGCAGCAGCTCTGACCACAGCGAGCGCTCGCCACTCACAGCTGTCTTCACGGCTGGGTGCTTCTCTGCTCCGATAGACCTGGTCAAAGTGCGTCTGCAGAGCCAGACGACGGGTTATAAATACAGAGGCCCCACACATTGTGTAGCTGTGATCTTAAGAGAGGACGGGGTCAGAGGGCTGTTCAGAGGAATGGGAGCTCTTGCCCTACGAGACGTGCCGTGTTATGGACTTTACTTCCTGCCGTACGAGTTCACCTGCAGGATGCTGACTGAGAAAGGGAAGCAGCCAGGTAACAATGCTGTGCTAGTGGCCGGTGGCGTTGCTGGTGTGGTCACATGGGCCTGCGCCACACCTATGGACGTGGTCAAGGCTCGACTGCAGATGTCTGGAGGCGGCGGGCGGGTGTACAGCGGTCTGCTGCACTGCATTACTGTGAGTGTGCGTGAAGAGGGCGTGAGAGTGTTCTTCAAAGGCCTCCTTCTGAACAGC

Function

symbol description
slc25a45 Predicted to enable acyl carnitine transmembrane transporter activity. Predicted to be involved in acyl carnitine transport and amino acid transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane.

GO: NA

KEGG:

id description
K15123 SLC25A45_47; solute carrier family 25, member 45/47

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_07212957_07217869.mRNA True 698 mRNA 0.54 4 7212957 7217869

Neighbor

gene id symbol gene type direction distance location
CI01000059_07156085_07160233 NA coding downstream 52724 7155716 ~ 7160233 (-)
CI01000059_07144283_07150061 NA coding downstream 60256 7143846 ~ 7152701 (-)
CI01000059_07002729_07060398 DLG4 coding downstream 152559 7002677 ~ 7060398 (-)
CI01000059_06914640_06936857 NA coding downstream 276100 6913862 ~ 6936857 (-)
CI01000059_06817935_06848280 NA coding downstream 364677 6817890 ~ 6848280 (-)
CI01000059_07222636_07225677 NA coding upstream 4584 7222453 ~ 7225677 (-)
CI01000059_07226610_07230853 NA coding upstream 8741 7226610 ~ 7230853 (-)
CI01000059_07379550_07383609 NA coding upstream 161057 7378926 ~ 7383674 (-)
CI01000059_07399949_07406822 USP39 coding upstream 182061 7399930 ~ 7406992 (-)
CI01000059_07418303_07423995 MAT2A, MAT2AA, MAT2AB coding upstream 200223 7418092 ~ 7424051 (-)
G255735 NA non-coding downstream 44104 7167506 ~ 7168853 (-)
G255691 NA non-coding downstream 166356 6932138 ~ 7046601 (-)
G255719 NA non-coding downstream 309490 6901490 ~ 6903467 (-)
G255238 NA non-coding downstream 401932 6810802 ~ 6811025 (-)
G255158 NA non-coding downstream 411352 6797770 ~ 6801605 (-)
G255740 NA non-coding upstream 13919 7231788 ~ 7231999 (-)
G255742 NA non-coding upstream 16246 7234115 ~ 7234338 (-)
G255697 NA non-coding upstream 56553 7274422 ~ 7327314 (-)
G255681 NA non-coding upstream 103650 7321519 ~ 7325568 (-)
G255840 NA non-coding upstream 454179 7672048 ~ 7672829 (-)
G255092 NA other downstream 970165 6236106 ~ 6242792 (-)
G254203 NA other downstream 1974658 5237786 ~ 5238299 (-)
G253914 NA other downstream 2458875 4753538 ~ 4754082 (-)
G253013 NA other downstream 3741048 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 5113290 2094279 ~ 2098985 (-)
G256890 NA other upstream 1763827 8981696 ~ 8982117 (-)
G257014 NA other upstream 2236347 9454216 ~ 9599008 (-)

Expression


Co-expression Network