CI01000059_07712901_07717294


Basic Information

Item Value
gene id CI01000059_07712901_07717294
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7711624 ~ 7717393 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_07712901_07717294.mRNA
AGAGGCTGTAGTTTTCTTCCAGTCCTGAGGGGGGCAGCGGCGTGTCCGGCGGTGCTCGCGGCGGTCCTCAGGTCACTGCAGCTCCTTGTATTTGTTGAAATGGCGAAGTTTGGCGATTTGAAAGCTTTTCTTGAATCTTCATTAAATGAAATCTTCCGTGTGACTGTCAGTGACATCCTGGATTCAGTGGAACAAACTGTCAGCGAATATCAGCGTAAAATTCAGAGAATTGAGTCCGAAAACGATGATCTGAGAAAACGACTTTGTGCAAAAGAGAAAAGGACAAATCACATCAAAACAGAAGATGAAGATTGTGTTTTTCAGCTTGACTTTTCAAGAAAGAATTTCAGCCAAGATCTGTTTTCATCTGCTCATACAAGTGAATATAATGATCAAACCAAGATCGCTGGAGATTTACGGAGCAGCTGTGTGAAACCACAAACCCCAGATGTCAAATCAAACCAGTTAAACAAGGATTGTGCAACAACAACAGATCTATTTGTAAAGGCCGACCCAGACACTGAGGACGGATGTGCCGTAGACCTCTCAAATCCTCACGCTTCTCCTAAATACACCGATAAAGAAATCAAAACGGAGAATACAGAGGAGAACTGTGGCTCTGAACGCCAAAATATATTTAAACGTCCTTTAGAGCCGGAGATCAACTCCAATGACTGTGACGTGAAAGTGACGGTGGTGTCAGACAGACACCTTTATCCTGCTGGTGACGAGGAGGACGCCCGGGAGTCACCGGAGTTCAGTCTGATCTCTGATGAAGAGTCAAATCCAGACGGACTGTCTGATGAGGGATTTTCTGGAGTGTTTCACGTGACGGAGTCTCCGCCGATCCCTCAGGATCCGAAACCGGATTATTACTGTAGAATACCATGGTACTTTGTTGCACATTGCACACATACTGTACTGATGTTTGATATGGTAGATGAGTCTTCATTCCTTTAGGCAGTGTCTTCTGTCTGTAAGTGTTCATTCATTCATGCTCATTAGAAATCAGTGCTGTCGTCCTGTATGAACCGGTTTGTTGAATATGAAGAAGTTATAGTAAGTAAACACTTCTTGGATGAAATGCAATTTAATTTAAGAATATTGTGTAATATCTTTTCTATGTACAGCATTGTGTATTTAATGATAATTTCAACTATTCTTGAATGTTAAAGGATTAGTTCACTCCAGAATTAAAATTGACTCCCCCATGTCATCCAAGATGTTTATGTCTGTCTTTTTTCAGTTGAAAAGAAATGAAGGTTTTTGAGGAAAACATTCCAGGATTTTTCTCCATATAGTGGACCTTCAACGGGTTGAAGGTTCAAAATGCCATTTCAGTGCAGCTTCAAGGAGCTCTACATGATCCCAGCCGAGGAATAAGAGTCTTATCTAGCGAAACGATCTGTAATTTTTAAATATATATATATATATATATATATATATATATATAAATATAAATTACAGATCGTGCAAGACGAACATTTGTGGTTAAAAAGTGTGTGTGTGTGTGTGTATATATATAATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATACTTTTTAACCACAAATGTTCGTCTTGCACTAGCTCTGCTATGTGCGTCCATGACTTTGGAAAGGTCACACCTGATGTAGGCGGAAGCACCGAAAAACTCCATCGCATTTTCTCCTCCAACTTCAAAATCGTCCAACATCGTTTTACCTTTTTTTCGTTTTTTTTTTTTTTTTTTTTTAAAGGGCGCTTGACTTGGTCTTTGCACGTTTGCTTTATAAACACTGGGTCGATACTTCCGCCTACATCACGCGTGACCTTTCCAACGTGATTACGTAATTGTGGGCGCTAGTGCAAGATGTGCATTTGTGGTTAAAAAGTATATAAAATTTTCCTTTTTTTTTCTTTCCTTTTTTTTTTTTTTTTTTAAATCGTTTCACTAGATAAGATTCCTCGTCTGGGATCGTGTAGAGCTCTTTGAAGCTGAACTGAAACTGACATTTGGACCTTCAGCCCGCTGTACCCCAGTAAAGTCCACTATATGGAGAAATATGGTGAGTAAATTATCAGGAAATTTTAATGCTGGAGTAAACTAATCCTTTAACTCGAAGCTTCAGTGATAAAATAAA
>TU290377
GGCGCTTGACTTGGTCTTTGCACGTTTGCTTTATAAACACTGGGTCGATACTTCCGCCTACATCACGCGTGACCTTTCCAACGTGATTACGTAATTGTGGGCGCTAGTGCAAGATGTGCATTTGTGGTTAAAAAGTATATAAAATTTTCCTTTTTTTTTCTTTCCTTTTTTTTTTTTTTTTTTAAATCGTTTCACTAGATAAGATTCCTCGTCTGGGATCGTGTAGAGCTCTTTGAAGCTGAACTGAAACTGACATTTGGACCTTCAGCCCGCTGTACCCCAGTAAAGTCCACTATATGGAGAAATATGGTGAGTAAATTATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_07712901_07717294.mRNA False 2237 mRNA 0.37 3 7711624 7717393
TU290377 True 325 lncRNA 0.39 1 7711683 7712007

Neighbor

gene id symbol gene type direction distance location
CI01000059_07656183_07663641 KISS1RB coding downstream 47977 7656046 ~ 7663647 (-)
CI01000059_07650742_07651278 NA coding downstream 57809 7650601 ~ 7653815 (-)
CI01000059_07630261_07641794 NA coding downstream 69830 7629789 ~ 7641794 (-)
CI01000059_07614355_07620651 PSAT1 coding downstream 90813 7614039 ~ 7620811 (-)
CI01000059_07585791_07609336 NA coding downstream 102288 7585605 ~ 7609336 (-)
CI01000059_07735781_07738322 NA coding upstream 17971 7735364 ~ 7739192 (-)
CI01000059_07747741_07755772 PAX8 coding upstream 30076 7747469 ~ 7755772 (-)
CI01000059_07776352_07781815 ARL3.1.S, ARL3, ARL3.1 coding upstream 58582 7775975 ~ 7781815 (-)
CI01000059_07796952_07805283 LMAN2L coding upstream 79398 7796791 ~ 7805283 (-)
CI01000059_07872877_07881890 NA coding upstream 154618 7872011 ~ 7883054 (-)
G255855 NA non-coding downstream 1662 7709593 ~ 7709962 (-)
G255845 NA non-coding downstream 26779 7684637 ~ 7684845 (-)
G255840 NA non-coding downstream 38795 7672048 ~ 7672829 (-)
G255697 NA non-coding downstream 384310 7274422 ~ 7327314 (-)
G255681 NA non-coding downstream 386056 7321519 ~ 7325568 (-)
G255866 NA non-coding upstream 45139 7762532 ~ 7762743 (-)
G255870 NA non-coding upstream 49162 7766555 ~ 7766761 (-)
G255886 NA non-coding upstream 117996 7835389 ~ 7836068 (-)
G255894 NA non-coding upstream 150822 7868215 ~ 7869519 (-)
G255092 NA other downstream 1468832 6236106 ~ 6242792 (-)
G254203 NA other downstream 2473325 5237786 ~ 5238299 (-)
G253914 NA other downstream 2957542 4753538 ~ 4754082 (-)
G253013 NA other downstream 4239715 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 5611957 2094279 ~ 2098985 (-)
G256890 NA other upstream 1264303 8981696 ~ 8982117 (-)
G257014 NA other upstream 1736823 9454216 ~ 9599008 (-)

Expression


Co-expression Network