CI01000059_07872877_07881890


Basic Information

Item Value
gene id CI01000059_07872877_07881890
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 7872011 ~ 7883054 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_07872877_07881890.mRNA
AGAAAAGAAATACTAAATAGGCCTAACACATGAATGAAGCTGTACTGAATCTGTACTGAATCCTCTTGAATGAGTTTTCATTCAGCTTTAACTGTAGTCAGTCACTGAATGATACTGTGAGCTTTAATGAAGCACTGCACTCGTCTTTTCTTCCCTATTGTGCCGTATATCCGAGTGAAACGCTTCTGGAACAAGAACAAATGTAGGGCGAGGCTTGATTTTGTCCGCTGGCAATTGATTAGATAGTTGTGGTTTGCTATTGGTGGATCTCATGTGAGTGACAGGTTGCCCCGCCCTTGTCATCAGAGAAGAGAAAAGGGAGGGAAAGTAGCTCAAACAGTCAATCATGGCAACTCCAAGGTCATGGGTTCGATTCCCAGTGAAAGCAAGAACTTTTTACCCTCTTTACACTACAAAGAATAGTAATTACAAGTAGGCTAGTTTTGGTGATTAAAATTAATGTATTTAGGTAGATTCAGCGTTATTATGTAATGTTTTGACTTGACTAAAATCAGTTCGTTTAGATGTTACCTATAGTTTAGGTAACCTTTTTTAAAGTGAAGCTACCTGATTTTAATGTGAATTTAATGTTACTTTAGTGTCATTTTCACTCATGTGAGTCAATGACCCGTTTAGAAAGAAGCCAAAGCCCTGCTAGGTGAAATATGTCATGAGTTGTGTAAATATATCTTTCAATATCAGAGAGGGAGACCATATGTCGGACGAGAGCGCGGAGGCTTACGGCAAAGCTGCCTTATCCACAGCATTACAGACTCTAAGAAAGGATTTACTTTTTAATTCTTGATTAGATAGAATGTTTCTGCTAAACGAAAGTAGAAAGAACACACACGACCTGGCCAACATGACTCACTCACTCACACACACAGACACACACACACACAAAAAAAAAAAAAAACATTAGTGTGATCATCATCAGCGCTGGATCGTACCGCGCGCGCGCACACACATAGCCTACACAAGCGCGCGCGCACAGCAGAGAGAGCAGGAGGAACTCGCGGTTTCCTCACAACACCTTCAGCCGCGTCTCTGAGGCGCACAAACAGCTGCCGGAGGCAAGGATGCGCGCGCTCTCGCGCTCGTGAGAATCTCCGCGGATCCTTCAGTCGCACTGGATCTGATGCGGGACACGAAAGCGCTGCATCCATGACTTTACCCGCGCTGCTGCTGTACGGGCTCGGACTGACTTTGGCATCAGCACTGCTTTCCACACAGGTCGCCGGCCTGCAGTGTTACGGCTGTAACGTCTTCCACGGGCAGAAGTATGTGGACGTGGGCTGCAGCCGTCCGGAGGTCATCACGTGCACACACTCGCACAAGGGCTTCAAGCACCGCTTCTGCATCAAGACGGAGAGCAATTCACAGAGAATCCATGAGTTTGTCTGTGTTCAGAAACACATCAATCTCAGTCGGCTAACATTAGCGGCGCTGGGCATCGTCCTTACCAGCGGCTGCGCCACTTCACGCCACTGTCAGCAGCAGGAACTGCCAGGCGTGAGCATCCACTGCTGCGACTCGGACCTGTGCAACAGCGCCACCCGCCGGCCGCCGCACACACTGCAGCTGCTGCTGGCTGCGCTCCTGTGGATGTGCTTATGATTCCTCTGCACCAGGAACTCTAGCAACGAGAAAGTGCACAGAACGCACAGCATTTCCACACGGATTTCCACTATTACACAGTAATGATCTCAACACCATCAGTCTTTATACGCGTTCATTTTGATTTCTCCTCATGAGAAACATCATGTAAACAGTTGTTTAGTCTGTTCTAGCGCTGTATTTTAGTTATGTTCTGCATGTACATCTACAGTAATTGCAATAACTATAGGTACTAAACTGAACCTGACCCTGTTTTCAATAGAGTAAAGATCGATGTTCAACGTGAAGTCAGTCACCATTAAATCAAAATTTACAACTCTTGTATTTTTTATTTATTTTTTTTATATTGCAGTGTTTATTATAAATGAATTATCAGTGCAGATTATTATTGTTTTAAATTCATGTTCCTCGTAATCTTGAATCAGAATAACTTCCCCTCCCTCTTGCAGTGACTTCTCTTCTCTGATGACGAGGGCGGGGCAACCTGTCACTCACATGAGATCCACCAATAGCAAACCACAACCATCCAATCAATTCTCCATGGACAAAATCAAGCCCCGCCCTACATTTGTTCTTGTTCCAGAAGCTTCCAGAAGAAACTTCCCTTTCATGACAACTTTAACGTTGGTCATGTGATCAAACGGTCATCTTTGAAAACATTTCTGCCGTTCTAAAACAGCATGGCTTATTTGCCATATGACTTACAAGTTTCGAGGAAAGTAAGAACAAATCTTTGATACTCCAGTTAGATTACAAATATGTTTGAATTTTAGGCCAATCTGAATCTTTAAACCTAAACAGCCTCGCCAAACTTTCTACAGCTTCTGGTGTTCTTAACGTTTATAACACCAACACCGAAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_07872877_07881890.mRNA False 2483 mRNA 0.44 4 7872011 7883054

Neighbor

gene id symbol gene type direction distance location
CI01000059_07796952_07805283 LMAN2L coding downstream 66728 7796791 ~ 7805283 (-)
CI01000059_07776352_07781815 ARL3.1.S, ARL3, ARL3.1 coding downstream 90196 7775975 ~ 7781815 (-)
CI01000059_07747741_07755772 PAX8 coding downstream 116239 7747469 ~ 7755772 (-)
CI01000059_07735781_07738322 NA coding downstream 132819 7735364 ~ 7739192 (-)
CI01000059_07712901_07717294 NA coding downstream 154618 7711624 ~ 7717393 (-)
CI01000059_07941129_07955904 TBX5 coding upstream 57430 7940484 ~ 7956194 (-)
CI01000059_07977090_07983037 TBX3, TBX3A coding upstream 93910 7976964 ~ 7983037 (-)
CI01000059_08031635_08038209 NA coding upstream 147134 8030188 ~ 8038209 (-)
CI01000059_08107732_08108249 NA coding upstream 224394 8107448 ~ 8108557 (-)
CI01000059_08188428_08219512 ABL1 coding upstream 305000 8188054 ~ 8219512 (-)
G255894 NA non-coding downstream 2492 7868215 ~ 7869519 (-)
G255886 NA non-coding downstream 35943 7835389 ~ 7836068 (-)
G255870 NA non-coding downstream 105250 7766555 ~ 7766761 (-)
G255866 NA non-coding downstream 109268 7762532 ~ 7762743 (-)
G255924 NA non-coding upstream 55356 7938410 ~ 7938741 (-)
G255927 NA non-coding upstream 80327 7963381 ~ 7969562 (-)
G255937 NA non-coding upstream 122053 8005107 ~ 8067466 (-)
G255942 NA non-coding upstream 144574 8027628 ~ 8027984 (-)
G255964 NA non-coding upstream 188135 8071189 ~ 8071799 (-)
G255092 NA other downstream 1629219 6236106 ~ 6242792 (-)
G254203 NA other downstream 2633712 5237786 ~ 5238299 (-)
G253914 NA other downstream 3117929 4753538 ~ 4754082 (-)
G253013 NA other downstream 4400102 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 5772344 2094279 ~ 2098985 (-)
G256890 NA other upstream 1098642 8981696 ~ 8982117 (-)
G257014 NA other upstream 1571162 9454216 ~ 9599008 (-)

Expression


Co-expression Network