CI01000059_08107732_08108249


Basic Information

Item Value
gene id CI01000059_08107732_08108249
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 8107448 ~ 8108557 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_08107732_08108249.mRNA
AGAGGACCACAGAAGACGATCAGGAGCGAGTGCTCATTGTGTTCACAACTCCTGTCCCTCGTTTGTTCTGAGATGCAGTGTGTTAAAAATAATCCAGCGCTCTGCAGCGAGACTCACACACACACACACACACACAGAGGCAGACAGGCCGGAGCCGGCGCTCGCCTCACACACAGACGACAGCAGGAAGAACCCAGCGCTGCACAAACGCCTCCGATGCAGCGTATGGATTTTCTCTCTTTTATGAGCGTCTCACTGGCCGGAGCCTCTAATATGCCCATAAATGTGCTGTACACAAACAGAAATAGATGCTCATCAGTTTACCACAGCTCAGACTACAGCCATCCTGCTGCTCCGCCGCGTCTGCATCCTCGCTTTTCTCCAATGCGCTTTTCAGGAACCCTAGATTTTCCTTTTTTGACCACTCACGCATCACGGAGGCATCTTCAAACGCAGCAGTGATGGCTGAAGCGAGCAGGAAAGGTGGCACAGCTTATCGCGCCGCGCCCGTCCTGCAGCGCGCCGAGCGGGCAATTATCCTGACGCAGTTCCTACACAACAAACACAATAAACGCACACGGAGGAGCGCCGTCGCCCTGCGGCTCTGGAATACCTGTGACGCATCAGGAAATTCCCACAATGCTTTGTTTTTCAAAGTCAGCATTTACGTGGGAATTCAGCCAGTCATTAAAGCAGAAGTTTTAGTGAATTTGGCCTGAAGAGGCATCTAAGTCAGAGACGTTTGATTGATAAAGACCAGTGATAGGCATCAGCTGAAGGGACGGGACGAACCATAAAGCGTTTATTGCCGTCATTAAACTTTGCTTAGGCAGTGACAGTGTTCAGAGTGATTTCAGATCATGCACTGATTCAGCACACCTGTGTAATGAGACACTGAGGTAGTGAAAGCAAACATCCCCGTTCCTGAAATAATATACTTTAGAAATAGTCACCTGACAGCGAACTCTTGCAGGTGAATTCTGGGAATTACTGCAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_08107732_08108249.mRNA True 1003 mRNA 0.49 2 8107448 8108557

Neighbor

gene id symbol gene type direction distance location
CI01000059_08031635_08038209 NA coding downstream 69239 8030188 ~ 8038209 (-)
CI01000059_07977090_07983037 TBX3, TBX3A coding downstream 124411 7976964 ~ 7983037 (-)
CI01000059_07941129_07955904 TBX5 coding downstream 151254 7940484 ~ 7956194 (-)
CI01000059_07872877_07881890 NA coding downstream 224394 7872011 ~ 7883054 (-)
CI01000059_07796952_07805283 LMAN2L coding downstream 302165 7796791 ~ 7805283 (-)
CI01000059_08188428_08219512 ABL1 coding upstream 79497 8188054 ~ 8219512 (-)
CI01000059_08221332_08227552 NA coding upstream 112713 8221270 ~ 8227552 (-)
CI01000059_08251075_08251545 NA coding upstream 142397 8250954 ~ 8251545 (-)
CI01000059_08263161_08266360 OXT coding upstream 154440 8262997 ~ 8266360 (-)
CI01000059_08286190_08290114 EDF1 coding upstream 177543 8286100 ~ 8290114 (-)
G255970 NA non-coding downstream 26865 8080377 ~ 8080583 (-)
G255967 NA non-coding downstream 30648 8076569 ~ 8076800 (-)
G255964 NA non-coding downstream 35649 8071189 ~ 8071799 (-)
G255937 NA non-coding downstream 39982 8005107 ~ 8067466 (-)
G255942 NA non-coding downstream 79464 8027628 ~ 8027984 (-)
G255994 NA non-coding upstream 6721 8115278 ~ 8115480 (-)
G256584 NA non-coding upstream 19894 8128451 ~ 8164532 (-)
G256571 NA non-coding upstream 73099 8181656 ~ 8183011 (-)
G256633 NA non-coding upstream 125664 8234221 ~ 8234508 (-)
G256636 NA non-coding upstream 140965 8249522 ~ 8250791 (-)
G255092 NA other downstream 1864656 6236106 ~ 6242792 (-)
G254203 NA other downstream 2869149 5237786 ~ 5238299 (-)
G253914 NA other downstream 3353366 4753538 ~ 4754082 (-)
G253013 NA other downstream 4635539 3471475 ~ 3471909 (-)
CI01000059_02096875_02098872 CDC26 other downstream 6007781 2094279 ~ 2098985 (-)
G256890 NA other upstream 873139 8981696 ~ 8982117 (-)
G257014 NA other upstream 1345659 9454216 ~ 9599008 (-)

Expression


Co-expression Network