CI01000059_10006537_10067807


Basic Information

Item Value
gene id CI01000059_10006537_10067807
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 10006445 ~ 10067845 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_10006537_10067807.mRNA
AGGCCGCTTTATTAAGTTGAGAAGATGGATCGAGGAGAATGACTTGTATTGATTTCGGTGCTGGGCTGAGAAGCCACATCATTCTTCAGACAATAACAGACCAGCTTCCTCTAGCATCTGTGCTTGTCTTTCTCTTCTATCTGACGGTGGGGAAATATAAATATATCAAAACTTCATCTGTGACACATGATCTGGTATTAAGATCCAGATCAGATGATCTGAAGATAACTGCTCAGAAATGTGATTGTCTTCTGAGTCTGAAAGCAACTTCTCTGGAGCAAAAAGCAAGAGTGTGCCAGTGTTTGAGCGAGAACATCCAAAAACAGCTTCAGCTGCACGGAAGACAGACGTTCTGCCCACCTCAGCAGGCCATTTTCAGCAGTGCAAACAGAGCAGATAGGGCTACCATGCTGGAACCCAAGCAAGATGAGCCATGTGACCCCAGGGGCCGGAAAACGACCTCTGAGGATGACCAATCCCTGGGCAACCTGTCCGATGTGTCGGCCACCACTGCGAGCAGCCTTCAGTCCAGGAGTCTCGCCCTGCTGGAGGACGTGTGTACCTCTCTGGAGGAGACCTGCCACCTGGTTCCACCAACACCTCCGCCTTCCACTGAGGGAGAAGATGAGAAAAGCACTGAGAGCAGCGTGAATGAGATATGGAGGGAGGATGAAGGCAAAGAGAAAGAGGAGGAGATGAGGAGCTCTGAGGAGAAAGAAGAGCGGGAGTTCTTACATGCACATCCAAGAGAGTGTGAAGATGACAAACAGCTACTTGTTGATGAGGACAATGCTTCAGAGGCGGTGGACACGAACGCTCCTCCTTCATCATCTTCTTCATCTTTTGTCATCCCTGAGCTGCGATTAGATCGCTCCTTCAGTGCGGACGCCCTCTCCACTCCTGGCACCGATGAAGAACGCACACACAGCGAGGGCAGTCTTCTCCAGGACCCCCGCACTACCTGCTTCACATCTGATAATGCCATCAACTGCATGGAGGGGTCAGGGACACACAAGGGCGGCTGGTCGCTTCCGTCACCCAAAACCCTGAAGAAAGAGCTGACTAAAAATGGAGGGTCCATGCACCAGCTGTGTATGCTGTTCTCCGGAAGAAAACTGAGTGCCGGCTCCGAATGCAGCTGTGACGTGGGTCCTGACGGGACCAAGAAGAAGAAATCCAAAAACCTAACAATAGAATCAGAACGACTCTCTGGGCTTCAGCTCCCTGTGTTCTTTGGTCGGATAACTACATCTACTGTGAATTTTGAGGTCAACACAATAAAGGAAAGGTTTTTACTGTCTGGTGAAGTGGGACTGTCTGGAATAATGTCTGGAGTCGCTAAATCTGAGCTTGAAGAAAGTTCAGTGAATGTTTCCTTTGATACAGGGTTTTTTTTTTCCACAAAGAGACGTGTCTAGTCTCCTTCAGACCTAGAGCTTCAAGCTAATCTGTGGTGAAATGATCTGGATGTTTATCAGCCACTGCTTTTTCAGATCTGATGGGGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_10006537_10067807.mRNA True 1510 mRNA 0.49 7 10006445 10067845

Neighbor

gene id symbol gene type direction distance location
CI01000059_09996144_10002811 NA coding downstream 3583 9996053 ~ 10002862 (-)
CI01000059_09990989_09995182 RGS3A, RGS3 coding downstream 11194 9989503 ~ 9995251 (-)
CI01000059_09908635_09925766 ZNF618 coding downstream 80679 9907887 ~ 9925766 (-)
CI01000059_09797419_09887264 PAPPAA, PAPPA coding downstream 119181 9797380 ~ 9887264 (-)
CI01000059_09783667_09789126 NA coding downstream 217147 9783629 ~ 9789298 (-)
CI01000059_10078245_10087217 NA coding upstream 10357 10078202 ~ 10087217 (-)
CI01000059_10112766_10123616 DNAJC25 coding upstream 44465 10112310 ~ 10123616 (-)
CI01000059_10226065_10230940 FKTN coding upstream 158001 10225846 ~ 10230940 (-)
CI01000059_10234027_10257208 FSD1L coding upstream 165313 10233158 ~ 10257208 (-)
CI01000059_10273383_10276157 NA coding upstream 204773 10272618 ~ 10276157 (-)
G257276 NA non-coding downstream 30405 9975614 ~ 9976040 (-)
G257275 NA non-coding downstream 31850 9974360 ~ 9974595 (-)
G257272 NA non-coding downstream 37770 9968436 ~ 9968675 (-)
G257270 NA non-coding downstream 41177 9965042 ~ 9965268 (-)
G257245 NA non-coding downstream 229970 9776206 ~ 9776475 (-)
G257299 NA non-coding upstream 29871 10097716 ~ 10097915 (-)
G257063 NA non-coding upstream 48520 10116365 ~ 10204537 (-)
G257085 NA non-coding upstream 134569 10202414 ~ 10203467 (-)
G257073 NA non-coding upstream 139003 10206848 ~ 10207701 (-)
G257014 NA other downstream 407437 9454216 ~ 9599008 (-)
G256890 NA other downstream 1024328 8981696 ~ 8982117 (-)
G255092 NA other downstream 3763653 6236106 ~ 6242792 (-)
G254203 NA other downstream 4768146 5237786 ~ 5238299 (-)
G253914 NA other downstream 5252363 4753538 ~ 4754082 (-)

Expression


Co-expression Network