G251315


Basic Information

Item Value
gene id G251315
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 301527 ~ 306469 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU285278
GCCAAGCTCATGTTCTAAAGGTTATATTGTACATCATGCATTTCTTGACAGAATACATGTACTAAGCCTTAGATAAAATAGTTATTACAACCACCACACTAATTCTCAACAATTTAACATTTAATAGTCAATTATTCATAAGATGTAATATTCTAACTACATGTAATATTCTATATAATATTTTTATATAAACTGTAGAATACCACAGAACAGTCACAACATTCAGTCCCTGCTATAAAAGTGATTCATTCAAATAAACATAAGTGGTATTGTGATGCTTTAGTTGGCAGAAAAACCCTAAACGATTAAAAGGAAAGAGTAAATGAATGTCTGAAAGAAGAGTGAAAGACTATCGGCTCATTTATTTACCTTCTGGCTGAAGGGCCACTTCAGCAGTGCATCGTATTTGCCTCTCATGACCACAAAGAACAGGGAGAGGTGAGTGCCCCGACCTGTGCCGTCACCATTCAGGTAGAGTCTCAGACACATCTTATACCCATATTTACTGGAGTAGAATGCTGAAGAACAGAAGAAAGGTGCTAAACAGCAGGGTCAGAAATATCACCAAAATGAAAATGCTTCACTAAAATCAGCTCCAAAAACAATAAATGTGAAGAAACACTCAAATACTCAAAAATGTGAAACAGCTACTCAGCTTGAGAATTTATTTTAAATAATAAATTTAACTGAAACTTGACAAAAACAAATAACACTGTTTTTACTCAGACACATATGTTGTAAATTTTAACTTTCACATAAGCTTGAAAAATTCCCACAAAGAATCAAGGCCCTCAAGTTCCAGACAAGTTCTACTTACAATTTACTAATTTACAAAATGCAAAGTATGATTACATTTATATTGAACCAAGAACATTCCAGGACACAAGTTCAATCAACAGCATTTGTGACAATGTTGAATACCACAGAAAATAATTTACAATTATATGATTATATAGATTATTCTCTTATAAATCACCCCTTGGTATAAAAAATTAAATAGATAAATGAATAAATAATAAATGCTTAAAATAATGCACTTATAATGGAAATAAACAGAAATATTAAATAGTGTGATAGAATGACCAGAACCTTGTCTGTATAAAGTTATATATACTTTTGTCATCATGGCAAATAACTGTAAAGCACCTGTTAAAGGACAAGTTCACTTCAGAATTAAAATTTCCTGATAATTTACTCACCCCCATGTCATCCAAGATGTTTGTCTTTTTTTCTTCAAAAAGAAATTAAGGTTTTTGAGGAAAGCATTCCAGGATTTTTCTCCATACTAGTGGACTTTAACCGCTACCAACGGGTTGAAGGTCCAAATTGCAGTTTAAATGAAGCTTCAAAGGGCTCTACACGATCTCAGCTGAGGAATAAGGGTCTTATATAGTGAAACGATCGGTCATTTTCTAAAAAATGTAGGCAGTACTTCCACCTATTTACTCACCCCCATGTCATCAAAGAGGTCTTCTTTTTCTTCAGATGAAAAGAAATTAAGGTGTTACGTCTATTACGTAATGTTATACTTTAGTTGTGTTCCTGCTGTCTTTTTTCTCTTTCAGGATTGGTCCTGGGCATAACGAGAGGCTGCTGGTGGTTGGACCAGAGAAGAGACCCGGACTATAAATTTCCCCGGGATTCCGCTGGAGGGAGCTCTCTGCCTCTTTGACTGTTTACTCATTACTGTTTGTGTTTGATACTGTGTTAGCTCTGATGAATATGTTGTGTCACATTGTGAGTTGTGCTCCAACAGAGTGCTGTTAGCCATCTTTGATTGTGAGAACCTTATTGCTAGAACATCAATGTCCTGCCGACCATGTTTGTAACTTCTTAACTATCTTGGGAAGCTGTAGGGGGTGAGAACATGGCAGGTGCTCGGCCCCCCACTGCATCTTGTCTGCGTCGAGAGAAGTCTGCTATTTTCCAAATGAAAACTCCATCGTATGTGCAAAACTGCAGCTCCCGCAAAGACTGCTCGGATTCTGCTAACTGCAGGTCTCGCATGGTTAAAGTCCGTTCCAGCTGTCGCACCTTCAAAAGGCAACAAACACAGATGAAAAACAGGGTTATGGAACTGCCAAACAGCAATGTAGCATTTGACATTTGATGCTAACACTTCAAGGATACATCTACACCTACACAGGTGTCTATGGTTCAATGATATGTTAAATGGAGAAGTTCATTCATTAAATGAAAATGAAAACGATTAACTCCTAAGCTGCAATGGAGCTGTAGTAAAATGATGATATACTGACATAATGAAATGACACACATGAAATATAAGTAAACACTTGTCTATTGCGTCTTTCTGAAATTTCATGGGTGCCTCTTCCCTTTTTCTCACAGTTGACAACATTGATACCGTACATGGTTTTTGTTTTATTAGTGTTTATGGTTCTATGGTAACTGTTAAATGAGTAGTTTTGTCATTAAAGGAGTAATTTAGGTTAAAAAATAAAATCATAATAATTTAAAATATTTTAAAATAAAATTTTAAATAATAAAAAAGGTCATCATTGGATTAAAATTTTTGGTTAAACTACTCTTAACGCAATGATCAACTGATCAATTAGCAGAAAGTCCAGGATGGATCCCATTTCATATCCCATGTGAATTAAGGATCATGGCAGAGACAGCGGAGGCTCTTCTGCTGGGGGAGGAAAAACACACATCTGTGTTTCACAAGTAACAGTTGAACGGAAACAAATCTTGCTAACAACTGTTTCGTAGTGAAGGCTTCTCCACTGGCAATCAAACACCTGACCTGAAAATGATAAACTGACTATTAACCTGCTCAATAAAAAGGATAGTTTACCCAAAAATAAAAACATTGTCATTTACACAATCCATGCTGTTCCAAACTTGCATGACTTTTTTTCCTTCTATGAGAACATGTCGCGCCCAAACGTAACATACCAGCACTATCAGAAAAAAAAAAAAAAAAAAAAAAAAAAGTGCAAAAATTGTACCTTCAGTAATTATAAATTCACTTAAACAAACCTATCATATGGTTTCAGAAGTTGTATGGACCATCAACAGTGCTTTCTGTCATTTTTGGAAATTGATAACATCTGTCCCCAATTCACTTTCATTTATATGGAAAAGTAGAAAATTCTTCAAATTACTTCTTTTGTTATCCATGGAGAAAGAAAAATCCATACAGGTTTGTAACGACATGAGGGTGAGTAAAAGGTGACAGACCATTTTTGTGTAAACTATCCTTTTGAAGTAAATGTTGCACCAGCCTGTTATAAAACAAGATTGTTCAATACGTCATTATTTGGTTACCTGCAAGGTGAGAGCCTCGCATCACCTTCGGACACATAGCAGAGCATCAAAACCATCTCTGCTGTCCGAAAGAAAAAACAATCCTATAAATCCAACTTAGCGAGCTTTTTTTTTTTTATATATATTCTGAACTATTTAAGTGTATAATTTCCTGCAAGGTGTGCGTAGTACCTTATTTGACAAATTCTCGATCTTTTCCTGGTCTAGCCGATGTTGCCGGGATAGTGCCTCCAGGGTGAGGGCTGAACGTTCCACCTCTCTATTCAACACACACACTATGTTCTCCAAAGCTGTGACTTTCTGCTGCACACCAGGACCACCTCCTCTTCCTGCATTATGGGCGGCAGCATTAGGCCCCGCCGGAGGTGCATCTTCAGGTCCGCGATACAATCCCAGCCCGGAATCTTCCTGCCACTCTCCAGCCCCCTCGGCTCGCAGGCGCACAGAGGACAGCACAGATAGCATAAGACGCAAATGCTCCATCACACTGGTCTGCTCATGCTCCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285278 True 3800 lncRNA 0.37 2 301527 306469

Neighbor

gene id symbol gene type direction distance location
CI01000059_00274535_00278600 COQ4 coding downstream 22927 274387 ~ 278600 (-)
CI01000059_00213992_00224796 ZMYND19 coding downstream 76731 212582 ~ 224796 (-)
CI01000059_00196450_00199898 NA coding downstream 101629 196265 ~ 199898 (-)
CI01000059_00190249_00194415 NA coding downstream 107063 190110 ~ 194464 (-)
CI01000059_00185897_00188899 SLC25A35 coding downstream 112483 185837 ~ 189044 (-)
CI01000059_00311235_00321078 FBXW5 coding upstream 4577 311046 ~ 321078 (-)
CI01000059_00326063_00336542 HEM2, ALAD coding upstream 19568 326037 ~ 336542 (-)
CI01000059_00378673_00379901 NA coding upstream 72204 378587 ~ 380137 (-)
CI01000059_00456370_00458895 NA coding upstream 149815 456284 ~ 459440 (-)
CI01000059_00476366_00482307 NA coding upstream 169525 475994 ~ 482307 (-)
G251332 NA non-coding downstream 12474 288437 ~ 289053 (-)
G251334 NA non-coding downstream 14778 284279 ~ 286749 (-)
G251373 NA non-coding downstream 33421 267701 ~ 268106 (-)
G251372 NA non-coding downstream 34924 266102 ~ 266603 (-)
G251371 NA non-coding downstream 36459 264852 ~ 265068 (-)
G251375 NA non-coding upstream 24530 330999 ~ 331296 (-)
G251420 NA non-coding upstream 99256 405725 ~ 410613 (-)
G251421 NA non-coding upstream 99710 406179 ~ 411625 (-)
G251407 NA non-coding upstream 126442 432911 ~ 433470 (-)
G251469 NA non-coding upstream 238986 545455 ~ 545706 (-)
CI01000059_01253451_01254823 NA other upstream 945247 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1790228 2094279 ~ 2098985 (-)
G253013 NA other upstream 3165006 3471475 ~ 3471909 (-)
G253914 NA other upstream 4447069 4753538 ~ 4754082 (-)

Expression


Co-expression Network