G251587


Basic Information

Item Value
gene id G251587
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 955404 ~ 955643 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU285589
AAGCAGTGTTTTGAAATCGGCCATCACTATATAAGTCGTTATTTAGTTTTTTTGCCGCACCAAAAATATTCTCGTCGCTTTATAATATTAATATTGAACCACTGTACTCACATGAACTGATTTCATTATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGCTGGCTATGCAGGCCTTCACTGAGCCATCGGATTTCAACACAAATATCCCGTGTTCCGAAGATTAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285589 True 240 lncRNA 0.37 1 955404 955643

Neighbor

gene id symbol gene type direction distance location
CI01000059_00867492_00873239 NA coding downstream 82165 866665 ~ 873239 (-)
CI01000059_00853242_00855219 NA coding downstream 100120 852754 ~ 855284 (-)
CI01000059_00767393_00826328 NA coding downstream 128823 765733 ~ 826581 (-)
CI01000059_00697568_00720771 MAST4 coding downstream 234633 697568 ~ 720771 (-)
CI01000059_00570850_00600462 DKFZP459B1536, PIK3R1 coding downstream 354546 570850 ~ 600858 (-)
CI01000059_00991306_01000173 BMCC1, PRUNE2 coding upstream 35388 991031 ~ 1000173 (-)
CI01000059_01022397_01031991 NA coding upstream 66095 1021738 ~ 1032204 (-)
CI01000059_01042330_01049708 GNAQ, GNA11B, GNAQ.L, GNAQ.S, GNA11, GNA11.S coding upstream 86607 1042250 ~ 1049927 (-)
CI01000059_01062456_01073742 HNRPKL, HNRNPK coding upstream 106813 1062456 ~ 1073742 (-)
CI01000059_01118201_01130248 KCMF1, KCMF1.L, YOY6 coding upstream 162073 1117716 ~ 1130248 (-)
G251586 NA non-coding downstream 3044 952144 ~ 952360 (-)
G251583 NA non-coding downstream 15544 939642 ~ 939860 (-)
G251511 NA non-coding downstream 17609 933490 ~ 937795 (-)
G251569 NA non-coding downstream 68528 886667 ~ 886876 (-)
G251549 NA non-coding downstream 272387 682740 ~ 683017 (-)
G251589 NA non-coding upstream 3581 959224 ~ 959437 (-)
G251593 NA non-coding upstream 17910 973553 ~ 973909 (-)
G251505 NA non-coding upstream 160706 1116349 ~ 1116684 (-)
CI01000059_01144728_01188827 CAMK4.L, CAMK4 non-coding upstream 207365 1144124 ~ 1188827 (-)
G251510 NA non-coding upstream 220876 1176519 ~ 1185331 (-)
CI01000059_00378673_00379901 NA other downstream 575267 378587 ~ 380137 (-)
CI01000059_01253451_01254823 NA other upstream 296073 1251716 ~ 1254823 (-)
CI01000059_02096875_02098872 CDC26 other upstream 1141054 2094279 ~ 2098985 (-)
G253013 NA other upstream 2515832 3471475 ~ 3471909 (-)
G253914 NA other upstream 3797895 4753538 ~ 4754082 (-)
G254203 NA other upstream 4282143 5237786 ~ 5238299 (-)

Expression


Co-expression Network